DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment loqs and Adad1

DIOPT Version :9

Sequence 1:	NP_609646.1	Gene:	loqs / 34751	FlyBaseID:	FBgn0032515	Length:	465	Species:	Drosophila melanogaster
Sequence 2:	XP_006232340.1	Gene:	Adad1 / 294979	RGDID:	1359309	Length:	636	Species:	Rattus norvegicus

Alignment Length:	187	Identity:	38/187 - (20%)
Similarity:	70/187 - (37%)	Gaps:	43/187 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    56 PVKGA------PLGQRHVKLKKEKISAQVAQLSQPGQLQLSDVGDPALAGGSGLQGGVGLMGVIL 114
            ||:.:      |.|..........::::|.|::       .:..:|.|:.|..     .:...:|
  Rat    67 PVQSSAQTVTLPTGYSSESCSLSNMASKVTQVT-------GNFPEPLLSKGLS-----SISNPVL 119

  Fly   115 PSDEALK-FVSETDANGLAMKTPVSILQELLSRRGITPGYELVQIEGAIHEPTFRF-----RVSF 173
            |..:..| |:.:.....:   .|||.|.:....:.:....:.....|.:..|.|.|     .:.:
  Rat   120 PPKKIPKEFIMKYRRGEI---NPVSALHQFAQMQRVQLDLKETVTTGNVMGPYFAFCAVVDGIQY 181

  Fly   174 KDKDTPFTAMGAGRSKKEAKHAAARALIDKLIGAQLPE--------SPSSSAGPSVT 222
            |        .|.|::|||::..||:..:|:|:....||        .|...|.|.||
  Rat   182 K--------TGLGQNKKESRSNAAKLALDELLQLDEPEPRALEPAGPPPIPAEPIVT 230

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
loqs	NP_609646.1	DSRM	136..204	CDD:214634	17/72 (24%)
		DSRM	250..316	CDD:238007
		DSRM	394..460	CDD:214634
Adad1	XP_006232340.1	DSRM	139..204	CDD:214634	17/72 (24%)
Adad1	XP_006232340.1	A_deamin	291..611	CDD:280326
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166352133
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930