DRSC/TRiP Functional Genomics Resources

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Protein Alignment loqs and Zfr

DIOPT Version :10

Sequence 1:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster
Sequence 2:XP_006520120.1 Gene:Zfr / 22763 MGIID:1341890 Length:1082 Species:Mus musculus


Alignment Length:321 Identity:57/321 - (17%)
Similarity:95/321 - (29%) Gaps:113/321 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 TAMGAGRSKKEAKHAAARALIDKLIGAQLPESPS-----------------------------SS 216
            ||..||.|:...::..|:..  :.:.|..|.:||                             .|
Mouse   196 TAPKAGYSQGATQYTQAQQA--RQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVPSYTQS 258

  Fly   217 AGPSVTGLTVAGSGGDGNANATGGGDASDKTVGNPIGWLQEMCMQRRWPPPSYETETEVGLPHER 281
            |..|.|.:|.:|:...|                                   ||.         .
Mouse   259 ATYSTTAVTYSGTSYSG-----------------------------------YEA---------A 279

  Fly   282 LFTIACSILNYREMGKGKSKKIAKRLAAHRMWMR---LQETPIDSGKISDSICGELEGEPRSSEN 343
            :::.|.|....::..:.::...|...||...|..   .::||..:.::..      :..|:..:.
Mouse   280 VYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTGTTFTKKTPFQNKQLKP------KQPPKPPQI 338

  Fly   344 YYGELKDISVPTLTTQHSNKVSQFHKTLKNATGKKLLKLQKTCLKNNKIDYIKLLGEIATENQFE 408
            :|.::..||.....|...:...|.||..:.|    |...|.|...||...        .|:||..
Mouse   339 HYCDVCKISCAGPQTYKEHLEGQKHKKKEAA----LKASQNTSSSNNSTR--------GTQNQLR 391

  Fly   409 VTYVDIE--------EKTFSGQFQCLVQL---------STLPVGVCHGSGPTAADAQRHAA 452
            ....|:.        ......:.|.:|:|         ||.|..|...:..|||.|.:..|
Mouse   392 CELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPNVVSQATSSTAASASKPTA 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loqsNP_609646.1 DSRM_PRKRA-like_rpt1 134..206 CDD:380691 6/24 (25%)
DSRM_PRKRA-like_rpt2 250..316 CDD:380692 8/68 (12%)
DSRM_PRKRA-like_rpt3 393..463 CDD:380693 16/77 (21%)
ZfrXP_006520120.1 ZnF_U1 339..368 CDD:197732 7/28 (25%)
C2H2 Zn finger 341..363 CDD:275371 4/21 (19%)
PHA03255 390..>559 CDD:165513 13/63 (21%)
ZnF_U1 392..421 CDD:197732 3/28 (11%)
C2H2 Zn finger 392..414 CDD:275371 1/21 (5%)
ZnF_U1 589..620 CDD:197732
C2H2 Zn finger 592..614 CDD:275371
DZF 792..1046 CDD:128842
Blue background indicates that the domain is not in the aligned region.

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