Protein Alignment loqs and Tarbp2

DIOPT Version :10

• Sequence 1: NP_609646.1
• Gene: loqs / 34751
• FlyBaseID: FBgn0032515
• Length: 465
• Species: Drosophila melanogaster
• Sequence 2: NP_001403264.1
• Gene: Tarbp2 / 21357
• MGIID: 103027
• Length: 374
• Species: Mus musculus
• Alignment Length: 410
• Identity: 134/410 - (32%)
• Similarity: 194/410 - (47%)
• Gaps: 93/410 - (22%)

  Fly   100 GSGLQGGVGLMGVILPSDEALKFVSETDANGLAM---KTPVSILQELLSRRGITPGYELVQIEGA 161
            |||...|.|     |||.|.:          ||.   |||:|:|||..:|.|.||.|:|::.||.
Mouse     7 GSGTTTGCG-----LPSIEQM----------LAANPGKTPISLLQEYGTRIGKTPVYDLLKAEGQ 56

  Fly   162 IHEPTFRFRVSFKDKDTPFTAMGAGRSKKEAKHAAARALIDKLIGAQLPE---------SPSSSA 217
            .|:|.|.|||:..|.    :..|.|.|||.|||.||...:..|.|..:.|         |...|:
Mouse    57 AHQPNFTFRVTVGDT----SCTGQGPSKKAAKHKAAEVALKHLKGGSMLEPALEDSSSFSLLDSS 117

  Fly   218 GPSVTGLTVAGSGG---DGNANATGGGD--------------ASDKTVGNPIGWLQEMCMQRRWP 265
            .|..|.:..|.:..   .....:||.|.              :..::..||:|.|||:.:|:.|.
Mouse   118 PPEDTPVVAAEAAAPVPSAVLTSTGLGPFFFRSPPMEMQPPVSPQQSECNPVGALQELVVQKGWR 182

  Fly   266 PPSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAAHRMWMRLQETPIDS--GKISD 328
            .|.|....|.|..|.:.||:.|.:..:.|:|.|.|||:|||.||.:|.:|:...|:|:  |.
Mouse   183 LPEYMVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAAAKMLLRVHTVPLDARDGN--- 244

  Fly   329 SICGELEGEPRSSENYYGELKDISVPTLTTQHSNKVSQFHK--------TLKNATGKKLLKLQKT 385
                  |.||  .::::    .|.|       |:::.....        :|:|:.|:|:|.| ::
Mouse   245 ------EAEP--DDDHF----SIGV-------SSRLDGLRNRGPGCTWDSLRNSVGEKILSL-RS 289

  Fly   386 CLKNNKIDYIKLLG--------EIATENQFEVTYVDIEEKTFSGQFQCLVQLSTLPVGVCHGSGP 442
            |    .:..:..||        |::.|..|.|:|:||||.:.||..||||:|||.|..||:||..
Mouse   290 C----SVGSLGALGSACCSVLSELSEEQAFHVSYLDIEELSLSGLCQCLVELSTQPATVCYGSAT 350

  Fly   443 TAADAQRHAAQNALEYLKIM 462
            |...|:..||..||:||:||
Mouse   351 TREAARGDAAHRALQYLRIM 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
loqs	NP_609646.1	DSRM_PRKRA-like_rpt1	134..206	CDD:380691	33/71 (46%)
		DSRM_PRKRA-like_rpt2	250..316	CDD:380692	28/65 (43%)
		DSRM_PRKRA-like_rpt3	393..463	CDD:380693	35/78 (45%)
Tarbp2	NP_001403264.1	DSRM_TARBP2_rpt1	27..98	CDD:380719	33/74 (45%)
		DSRM_TARBP2_rpt2	167..233	CDD:380681	28/65 (43%)
		DSRM_TARBP2_rpt3	300..371	CDD:380722	33/71 (46%)