Protein Alignment loqs and Stau1

DIOPT Version :9

• Sequence 1: NP_609646.1
• Gene: loqs / 34751
• FlyBaseID: FBgn0032515
• Length: 465
• Species: Drosophila melanogaster
• Sequence 2: NP_001103376.1
• Gene: Stau1 / 20853
• MGIID: 1338864
• Length: 495
• Species: Mus musculus
• Alignment Length: 410
• Identity: 98/410 - (23%)
• Similarity: 155/410 - (37%)
• Gaps: 117/410 - (28%)

  Fly   134 KTPVSILQELLSRRGITPGYE---LVQI---EGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKKEA 192
            |:.:|.:.|:..:|.:...:|   |.|:   .|..|...|..|||..:    |...|.|:|||.:
Mouse    95 KSEISQVFEIALKRNLPVNFESFLLTQVARESGPPHMKNFVTRVSVGE----FVGEGEGKSKKIS 155

  Fly   193 KHAAARALIDKLIGAQLPESPS---------SSAGPSVTGLTVAGSGGDGNANATGGGDASDKTV 248
            |..||||::::|  .:||..|:         ..:.|:.. |..|...|.|.
Mouse   156 KKNAARAVLEQL--RRLPPLPAVERVKPRIKKKSQPTCK-LQTAPDYGQGM-------------- 203

  Fly   249 GNPIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAAHRMW 313
             |||..|.::...::...|.|...||.|||..|.|.:...:.::...|.|.:||:|||.||..|.
Mouse   204 -NPISRLAQIQQAKKEKEPEYMLLTERGLPRRREFVMQVKVGHHTAEGVGTNKKVAKRNAAENML 267

  Fly   314 MRL-----------------QETPI----DSGKIS--DSICGELEGEPRSSENYYGELKDISVPT 355
            ..|                 ::||:    |..|::  :...|:..|.....|.:       .:|.
Mouse   268 EILGFKVPQAQPAKPALKSEEKTPVKKPGDGRKVTFFEPSPGDENGTSNKDEEF-------RMPY 325

  Fly   356 LTTQ--------------HSNKVSQFHKTLKNAT---------------GKKLL-----KLQKTC 386
            |:.|              .:..|||.|.| |:.|               .::||     ...:|.
Mouse   326 LSHQQLPAGILPMVPEVAQAVGVSQGHHT-KDFTRAAPNPAKATVTAMIARELLYGGTSPTAETI 389

  Fly   387 LKNN----------KIDYIKLLGEIATENQFEVTYVDIEEKTFSGQFQC--LVQLSTLPVGVCHG 439
            ||:|          :....:.|..::....|:|.|.|..:   :.:.:|  |:..|:.|..|.||
Mouse   390 LKSNISSGHVPHGPRTRPSEQLYYLSRAQGFQVEYKDFPK---NNKNECVSLINCSSQPPLVSHG 451

  Fly   440 SGPTAADAQRHAAQNALEYL 459
            .|.........||.|.|:.|
Mouse   452 IGKDVESCHDMAALNILKLL 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
loqs	NP_609646.1	DSRM	136..204	CDD:214634	23/73 (32%)
		DSRM	250..316	CDD:238007	23/65 (35%)
		DSRM	394..460	CDD:214634	18/68 (26%)
Stau1	NP_001103376.1	DSRM	98..167	CDD:214634	23/72 (32%)
		DSRM	204..270	CDD:238007	23/65 (35%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	278..318		6/39 (15%)
		Staufen_C	366..475	CDD:293091	24/109 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167848497
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3732
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.740