Protein Alignment loqs and stau-1

DIOPT Version :9

• Sequence 1: NP_609646.1
• Gene: loqs / 34751
• FlyBaseID: FBgn0032515
• Length: 465
• Species: Drosophila melanogaster
• Sequence 2: NP_508196.1
• Gene: stau-1 / 180455
• WormBaseID: WBGene00018857
• Length: 705
• Species: Caenorhabditis elegans
• Alignment Length: 534
• Identity: 109/534 - (20%)
• Similarity: 178/534 - (33%)
• Gaps: 155/534 - (29%)

  Fly    56 PVKGAPLGQRHVKLKKEKISAQVAQLSQPGQLQLSDVGDPALAGGSGLQG------------GVG 108
            |..|.||.: |:.|..|.::     |..|....|..  |||...|..||.            |:|
 Worm   191 PDPGCPLPE-HILLPLESMA-----LYAPPFPTLPI--DPARPQGPKLQAVIVNINGKSIATGIG 247

  Fly   109 LMGVILPSDEALKFVS----------ETDANGLA--------MKTPVSILQELLSRRGITPGYEL 155
            ....:...|.|.|.::          ....||..        .|:.:|.:.|...:..:...:|:
 Worm   248 ETYPLAKQDAAAKALAVLSPLLREHQNGSDNGFGKENIPVHKQKSVISDIHEKAYQLKVNVVFEV 312

  Fly   156 VQIEGAIHEPTFRFRVSF--KDKDTPFTAMGAGRSKKEAKHAAARALIDKLIGAQLPESPSSSAG 218
            ::.||..|:..:..|.:|  ........|:|.|:.||.|:..|...|: ..:....||:...:..
 Worm   313 LKEEGPPHDRQYVVRCAFVTSGNVVKAEAVGKGKKKKSAQQEACTQLL-ATVEHLTPENNPVALA 376

  Fly   219 PSV--TGLTVAGSGGDGNANATGGGDASDKTVG---NPIGWLQEMCMQRRWPPPSYETETEVGLP 278
            .:|  |...:|....:............|...|   ||:..|.::...:....|::|...|.|:.
 Worm   377 TNVCKTQKKLAAMNREPKRKTIVKDKKMDPLYGHQINPVSRLIQVTQAKSKEHPTFELVAEHGVS 441

  Fly   279 HERLFTIACSILNYREMGKGKSKKIAKRLAAHRM------------------------------- 312
            ..:.|.|.....:..:.|||.:|::|||.||..|
 Worm   442 KYKEFIIQVKYGDDVQEGKGPNKRLAKRAAAEAMLESIGFVKPLPPPGKSLLKKMIDCDPSLPEI 506

  Fly   313 --WMRLQETPIDSGKISDSICGELEGEPRSSE--NYYGELKDIS-----VPTLTTQHSNKVSQFH 368
              |.....|.:   .:|.|       ||.:||  ....|..|||     .|....:.....||.|
 Worm   507 SHWTGPPPTAV---SVSTS-------EPDTSEAAQLSPEQTDISEKRELSPDTEKRRVTFNSQVH 561

  Fly   369 -------KTLKNATGKKLLKLQKTCLKNNKIDYIKLLGEIATENQFEVT---YVDIEEKT----- 418
                   :...|:.   :..|:|..:...||..:|.    :.||:..:|   .|::.|:.
 Worm   562 ACPPPGDQDYPNSI---VQSLKKDAIVEGKIRRLKR----SKENRRALTAEQIVELSERAQSYLQ 619

  Fly   419 --------------------FSGQFQCLVQLSTLP-VG----------------VCHGSGPTAAD 446
                                .|..|:..:|.::.| ||                |.||:|.:..:
 Worm   620 TKNTTIQSSQSSSAHHHLEQLSDFFKFSLQYTSFPQVGIDQHFTIVSIGLEAPLVGHGTGCSTTE 684

  Fly   447 AQRHAAQNALEYLK 460
            |..:||.:|:..||
 Worm   685 ADENAALDAIAKLK 698

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
loqs	NP_609646.1	DSRM	136..204	CDD:214634	16/69 (23%)
		DSRM	250..316	CDD:238007	20/98 (20%)
		DSRM	394..460	CDD:214634	20/110 (18%)
stau-1	NP_508196.1	DSRM	79..142	CDD:214634
		DSRM	294..364	CDD:214634	16/70 (23%)
		DSRM	414..480	CDD:214634	18/65 (28%)
		Staufen_C	<637..700	CDD:293091	16/62 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3732
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810