Protein Alignment loqs and rde-4

DIOPT Version :9

• Sequence 1: NP_609646.1
• Gene: loqs / 34751
• FlyBaseID: FBgn0032515
• Length: 465
• Species: Drosophila melanogaster
• Sequence 2: NP_499265.1
• Gene: rde-4 / 176438
• WormBaseID: WBGene00004326
• Length: 385
• Species: Caenorhabditis elegans
• Alignment Length: 400
• Identity: 80/400 - (20%)
• Similarity: 140/400 - (35%)
• Gaps: 123/400 - (30%)

  Fly   124 SETDANGLAMKTPVSILQELLSRRGI---TPGYELVQI-EGAIHEPTFRFRVSFKDKDTPFTAMG 184
            :.||......|||:.:|:|  :.:.:   ||.:..|:: ||      |...:...:    .|..|
 Worm    32 NRTDLEMFLKKTPLMVLEE--AAKAVYQKTPTWGTVELPEG------FEMTLILNE----ITVKG 84

  Fly   185 AGRSKKEAKHAAARALIDKLIGAQLPE---SPSSSAGPSVTGLTVAGSGGD----GNANATGGGD 242
            ...|||.|:..||...:.|::.....|   .|.::...:::.:.......:    ..::|....|
 Worm    85 QATSKKAARQKAAVEYLRKVVEKGKHEIFFIPGTTKEEALSNIDQISDKAEELKRSTSDAVQDND 149

  Fly   243 ASD------------KTVGNPIGWLQEMCMQRRWPPPSYETETEVGLPHERL--FTIACSILNYR 293
            ..|            ....|.:|.|||...:.:...|.||..     .:||.  |.:.|::.|.:
 Worm   150 NDDSIPTSAEFPPGISPTENWVGKLQEKSQKSKLQAPIYEDS-----KNERTERFLVICTMCNQK 209

  Fly   294 EMGKGKSKKIAKRLAAHRMWMRLQETPIDSGKISDSICGELEGEPRSSENYYGELKDISVPTLTT 358
            ..|....||.||.|||..||..|:          |.|        .|.|:|  ::.|:.......
 Worm   210 TRGIRSKKKDAKNLAAWLMWKALE----------DGI--------ESLESY--DMVDVIENLEEA 254

  Fly   359 QHSNKVSQFHKTLKNATGKKLLKLQKTCLKNNKIDYIKLLGEIATENQFEVTYVDIEEKTFS--G 421
            :|                  ||::|....| .|..:..|:..::.:.:|....:|....:.|  |
 Worm   255 EH------------------LLEIQDQASK-IKDKHSALIDILSDKKRFSDYSMDFNVLSVSTMG 300

  Fly   422 QFQCLVQLS----------TLPVGVCH------------------------------GSGPTAAD 446
            ..|.|:::|          .|.:|..|                              |.|.:|.:
 Worm   301 IHQVLLEISFRRLVSPDPDDLEMGAEHTQTEEIMKATAEKEKLRKKNMPDSGPLVFAGHGSSAEE 365

  Fly   447 AQRHAAQNAL 456
            |::.|.::|:
 Worm   366 AKQCACKSAI 375

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
loqs	NP_609646.1	DSRM	136..204	CDD:214634	17/71 (24%)
		DSRM	250..316	CDD:238007	23/67 (34%)
		DSRM	394..460	CDD:214634	17/104 (16%)
rde-4	NP_499265.1	DSRM	42..103	CDD:214634	19/72 (26%)
		DSRM	170..233	CDD:214634	22/67 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_107751
Panther	1	1.100	-	-	LDO	PTHR46205
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000