Sequence 1: | NP_609646.1 | Gene: | loqs / 34751 | FlyBaseID: | FBgn0032515 | Length: | 465 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001007150.2 | Gene: | Stau2 / 171500 | RGDID: | 621479 | Length: | 571 | Species: | Rattus norvegicus |
Alignment Length: | 366 | Identity: | 89/366 - (24%) |
---|---|---|---|
Similarity: | 145/366 - (39%) | Gaps: | 93/366 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 125 ETDANGLAMKTPVSILQELLSRRGITPGYELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSK 189
Fly 190 KEAKHAAARALIDKLIGAQLP-----ESPS----------SSAGPSVTGLTVAGSGGDGNANATG 239
Fly 240 GGDASDKTVGNPIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIA 304
Fly 305 KRLAAHRMWMRLQETPIDSGKISDSICGELEGEPRSSEN--YYGELKDISVPTLTTQHSNKVSQF 367
Fly 368 HKTLKNATGKKLLKL-----QKTCLKNNKIDYIKLLGEIATE--NQFEVTYVDIEEKTFSGQFQC 425
Fly 426 ---LVQLSTLP----VGVCHGSGPTAADAQRHAAQNALEYL 459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
loqs | NP_609646.1 | DSRM | 136..204 | CDD:214634 | 20/67 (30%) |
DSRM | 250..316 | CDD:238007 | 23/65 (35%) | ||
DSRM | 394..460 | CDD:214634 | 17/75 (23%) | ||
Stau2 | NP_001007150.2 | DSRM_SF | 3..70 | CDD:412133 | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 71..94 | ||||
DSRM_STAU2_rpt2 | 98..179 | CDD:380711 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..203 | 0/1 (0%) | |||
DSRM_STAU2_rpt3 | 206..272 | CDD:380713 | 21/69 (30%) | ||
Nuclear localization signal 1 | 273..317 | 13/67 (19%) | |||
DSRM_STAU2_rpt4 | 304..389 | CDD:380715 | 29/108 (27%) | ||
Nuclear localization signal 2 | 373..412 | 12/64 (19%) | |||
Required for dendritic transport | 381..571 | 28/146 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 382..413 | 8/50 (16%) | |||
Staufen_C | 457..524 | CDD:374568 | 12/50 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 546..571 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |