DRSC/TRiP Functional Genomics Resources

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Protein Alignment loqs and ADARB2

DIOPT Version :10

Sequence 1:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_061172.1 Gene:ADARB2 / 105 HGNCID:227 Length:739 Species:Homo sapiens


Alignment Length:505 Identity:107/505 - (21%)
Similarity:155/505 - (30%) Gaps:183/505 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NLVGLGNGNAVSGSPVKGAPLGQRHVKLK-KEKIS------AQVAQLSQPGQLQLSD-------- 91
            :::|.|.|:....|.:|.....:|..:.| |:|:|      |....|| ||.....|        
Human     3 SVLGSGRGSGGLSSQLKCKSKRRRRRRSKRKDKVSILSTFLAPFKHLS-PGITNTEDDDTLSTSS 66

  Fly    92 ------------------VGDPALAGGSG------LQGGVGLMGVILPSDEALKFVSETDANGLA 132
                              .||.|..|..|      |:.|.|  |.:.    .|:.|.:..:..:|
Human    67 AEVKENRNVGNLAARPPPSGDRARGGAPGAKRKRPLEEGNG--GHLC----KLQLVWKKLSWSVA 125

  Fly   133 MKTPVSILQELLSRRGITPG--YELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKKEAKHA 195
            .|..:..|.||      .||  |..|...|.:|.|.|...|....    .|..|.|.:||:||..
Human   126 PKNALVQLHEL------RPGLQYRTVSQTGPVHAPVFAVAVEVNG----LTFEGTGPTKKKAKMR 180

  Fly   196 AARALIDKLIGAQLPESPSSSAGPSVTGLTVAGSGGDG-----------------------NANA 237
            ||...:...:  |.|.:..:.       |.:.|..|.|                       ....
Human   181 AAELALRSFV--QFPNACQAH-------LAMGGGPGPGTDFTSDQADFPDTLFQEFEPPAPRPGL 236

  Fly   238 TGG--GDASDKT---------------VG------------NPIGWLQEMCMQRRWPPPSYETET 273
            .||  |||:..:               ||            ||:..|..:....|     |....
Human   237 AGGRPGDAALLSAAYGRRRLLCRALDLVGPTPATPAAPGERNPVVLLNRLRAGLR-----YVCLA 296

  Fly   274 EVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAAHRMWM-------------RLQETPIDSGK 325
            |......|.|.:|.|:......|.|:|||:|:..||.....             |.:.||:.. :
Human   297 EPAERRARSFVMAVSVDGRTFEGSGRSKKLARGQAAQAALQELFDIQMPGHAPGRARRTPMPQ-E 360

  Fly   326 ISDSICGELEGEPRSSENYYGELKDISVPTLTTQHSNKVSQFHKTLKNATGKKLLKLQKTCLKNN 390
            .:|||          |:....:.::::. .||..|:.     ||.|......|.|..:       
Human   361 FADSI----------SQLVTQKFREVTT-DLTPMHAR-----HKALAGIVMTKGLDAR------- 402

  Fly   391 KIDYIKLLGEIATENQFEVTYVDIEEKTFSGQFQCLVQLST--LPVGVCH 438
                           |.:|..:....|..||:     .||.  |.|..||
Human   403 ---------------QAQVVALSSGTKCISGE-----HLSDQGLVVNDCH 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loqsNP_609646.1 DSRM_PRKRA-like_rpt1 134..206 CDD:380691 22/73 (30%)
DSRM_PRKRA-like_rpt2 250..316 CDD:380692 18/78 (23%)
DSRM_PRKRA-like_rpt3 393..463 CDD:380693 11/48 (23%)
ADARB2NP_061172.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 8/32 (25%)
R-domain (ssRNA-binding) 23..35 3/11 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..105 7/51 (14%)
DSRM_RED2_rpt1 122..195 CDD:380725 25/84 (30%)
DSRM_RED2_rpt2 271..343 CDD:380728 18/76 (24%)
ADEAMc 361..736 CDD:214718 23/115 (20%)

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