DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment loqs and ADARB2

DIOPT Version :9

Sequence 1:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_061172.1 Gene:ADARB2 / 105 HGNCID:227 Length:739 Species:Homo sapiens


Alignment Length:505 Identity:107/505 - (21%)
Similarity:155/505 - (30%) Gaps:183/505 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NLVGLGNGNAVSGSPVKGAPLGQRHVKLK-KEKIS------AQVAQLSQPGQLQLSD-------- 91
            :::|.|.|:....|.:|.....:|..:.| |:|:|      |....|| ||.....|        
Human     3 SVLGSGRGSGGLSSQLKCKSKRRRRRRSKRKDKVSILSTFLAPFKHLS-PGITNTEDDDTLSTSS 66

  Fly    92 ------------------VGDPALAGGSG------LQGGVGLMGVILPSDEALKFVSETDANGLA 132
                              .||.|..|..|      |:.|.|  |.:.    .|:.|.:..:..:|
Human    67 AEVKENRNVGNLAARPPPSGDRARGGAPGAKRKRPLEEGNG--GHLC----KLQLVWKKLSWSVA 125

  Fly   133 MKTPVSILQELLSRRGITPG--YELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKKEAKHA 195
            .|..:..|.||      .||  |..|...|.:|.|.|...|....    .|..|.|.:||:||..
Human   126 PKNALVQLHEL------RPGLQYRTVSQTGPVHAPVFAVAVEVNG----LTFEGTGPTKKKAKMR 180

  Fly   196 AARALIDKLIGAQLPESPSSSAGPSVTGLTVAGSGGDG-----------------------NANA 237
            ||...:...:  |.|.:..:.       |.:.|..|.|                       ....
Human   181 AAELALRSFV--QFPNACQAH-------LAMGGGPGPGTDFTSDQADFPDTLFQEFEPPAPRPGL 236

  Fly   238 TGG--GDASDKT---------------VG------------NPIGWLQEMCMQRRWPPPSYETET 273
            .||  |||:..:               ||            ||:..|..:....|     |....
Human   237 AGGRPGDAALLSAAYGRRRLLCRALDLVGPTPATPAAPGERNPVVLLNRLRAGLR-----YVCLA 296

  Fly   274 EVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAAHRMWM-------------RLQETPIDSGK 325
            |......|.|.:|.|:......|.|:|||:|:..||.....             |.:.||:.. :
Human   297 EPAERRARSFVMAVSVDGRTFEGSGRSKKLARGQAAQAALQELFDIQMPGHAPGRARRTPMPQ-E 360

  Fly   326 ISDSICGELEGEPRSSENYYGELKDISVPTLTTQHSNKVSQFHKTLKNATGKKLLKLQKTCLKNN 390
            .:|||          |:....:.::::. .||..|:.     ||.|......|.|..:       
Human   361 FADSI----------SQLVTQKFREVTT-DLTPMHAR-----HKALAGIVMTKGLDAR------- 402

  Fly   391 KIDYIKLLGEIATENQFEVTYVDIEEKTFSGQFQCLVQLST--LPVGVCH 438
                           |.:|..:....|..||:     .||.  |.|..||
Human   403 ---------------QAQVVALSSGTKCISGE-----HLSDQGLVVNDCH 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loqsNP_609646.1 DSRM 136..204 CDD:214634 21/69 (30%)
DSRM 250..316 CDD:238007 18/78 (23%)
DSRM 394..460 CDD:214634 11/47 (23%)
ADARB2NP_061172.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 8/32 (25%)
R-domain (ssRNA-binding) 23..35 3/11 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..105 7/51 (14%)
DSRM 126..188 CDD:214634 22/71 (31%)
DSRM 279..340 CDD:214634 17/65 (26%)
ADEAMc 361..736 CDD:214718 23/115 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158157
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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