DRSC/TRiP Functional Genomics Resources

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Protein Alignment loqs and ADARB1

DIOPT Version :9

Sequence 1:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster
Sequence 2:XP_016883731.1 Gene:ADARB1 / 104 HGNCID:226 Length:790 Species:Homo sapiens


Alignment Length:561 Identity:111/561 - (19%)
Similarity:177/561 - (31%) Gaps:240/561 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DQENFHGSSLP-QQLQNL-HIQPQQAS-PNPVQTGFAPRRHYNNLVGLGNGNAVS----GSPVKG 59
            |:||...||.. ::.:|| ::.|:..| |.|                 |.|:.:|    |.|.:.
Human    54 DEENMSSSSTDVKENRNLDNVSPKDGSTPGP-----------------GEGSQLSNGGGGGPGRK 101

  Fly    60 APL-----GQRHVKLKKEKISAQVAQLSQPGQLQLSDVGDPALAGGSGLQGGVGLMGVILPSDEA 119
            .||     |....:|||.:                                              
Human   102 RPLEEGSNGHSKYRLKKRR---------------------------------------------- 120

  Fly   120 LKFVSETDANGLAMKTPVSILQE--LLSRRGITPG--YELVQIEGAIHEPTFRFRVSFKDKDTPF 180
                          |||..:|.:  |:....|.||  |.|:...|.:|.|.|...|....:    
Human   121 --------------KTPGPVLPKNALMQLNEIKPGLQYTLLSQTGPVHAPLFVMSVEVNGQ---- 167

  Fly   181 TAMGAGRSKKEAK-HAAARALIDKLIGAQLPESPSSSAGPSVTGLTVA----------------- 227
            ...|:|.:||:|| |||.:||      ....:.|::|......|.|::                 
Human   168 VFEGSGPTKKKAKLHAAEKAL------RSFVQFPNASEAHLAMGRTLSVNTDFTSDQADFPDTLF 226

  Fly   228 ---------------GSGGDGNANATGGGDASDKTVGNPIGWLQ-EMCMQRRWPPPS-------- 268
                           ||.||.:.:::|....|...|  |....| .:.:...:||||        
Human   227 NGFETPDKAEPPFYVGSNGDDSFSSSGDLSLSASPV--PASLAQPPLPVLPPFPPPSGKNPVMIL 289

  Fly   269 --------YETETEVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAAHRMW-----MRLQETP 320
                    |:..:|.|..|.:.|.::..:......|.|::||:||..||....     :.|.:||
Human   290 NELRPGLKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAAQSALAAIFNLHLDQTP 354

  Fly   321 ----------------IDSGKISDSICGELEGEPRSSENYYGELKD-ISVP----------TLTT 358
                            :.:..:|..:.|:           :|:|.| .|.|          .:||
Human   355 SRQPIPSEGLQLHLPQVLADAVSRLVLGK-----------FGDLTDNFSSPHARRKVLAGVVMTT 408

  Fly   359 QHSNKVSQFHKTLKNATGKK--------------------------LLKLQKTCLK---NNKIDY 394
            ....|.:   |.:..:||.|                          ||:...|.|:   |||.|.
Human   409 GTDVKDA---KVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQ 470

  Fly   395 IKLLGEIATENQFEVTYVDIEEKTFSGQFQCLVQLSTLPVG 435
            .:.:.:.:....|.     ::|..   ||.  :.:||.|.|
Human   471 KRSIFQKSERGGFR-----LKENV---QFH--LYISTSPCG 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loqsNP_609646.1 DSRM 136..204 CDD:214634 24/72 (33%)
DSRM 250..316 CDD:238007 19/87 (22%)
DSRM 394..460 CDD:214634 8/42 (19%)
ADARB1XP_016883731.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158122
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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