DRSC/TRiP Functional Genomics Resources

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Protein Alignment loqs and Zfr2

DIOPT Version :10

Sequence 1:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001030067.2 Gene:Zfr2 / 103406 MGIID:2143792 Length:874 Species:Mus musculus


Alignment Length:368 Identity:78/368 - (21%)
Similarity:116/368 - (31%) Gaps:126/368 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 QASPNPVQTGFAPRRHYNNLVGLGNGNAVSGSPVKGAPL-GQRHVKLKKEKISAQVAQLSQPGQL 87
            :|.|.|      |..||..:..:    :.:|.......| ||:|    ::|.:||... :||.  
Mouse   196 KAGPRP------PSMHYCEVCRV----SCAGPQTYRDHLEGQKH----RKKQAAQRTS-TQPS-- 243

  Fly    88 QLSDVGDPALAGGSGLQGGVGLMGVILPSDEALKFVSETDANGLAMKTPVSILQELLSRRGITPG 152
                 |.|  .|...|..|             |..||.|.|:..|                    
Mouse   244 -----GGP--RGSQSLHCG-------------LCAVSCTGADAYA-------------------- 268

  Fly   153 YELVQIEGAIHEPTFRFRV----SFKDKDTP----FTAMGAGRSKKEAKHAAARALIDKLIGAQL 209
               ..:.||.|:..|:...    ....:.||    :|.......:...||.|.........|...
Mouse   269 ---AHMRGARHQKVFKLHTRLGKPIPSEPTPRSVTYTRGSDSTPETSVKHEAHARHSSHTQGRPA 330

  Fly   210 PE--SPSSSAGPSVTGLTVAGSGGDG-------NANATGGGDASDKTVGN--PIG--WLQEMCMQ 261
            |.  |.:|..||... .|:.|..||.       .|...|.|:||..: |:  |:|  :::|:|  
Mouse   331 PAKGSAASRKGPPEL-QTMHGRPGDRRPSHFKVEATRGGPGEASGSS-GDMAPVGTEYVEEVC-- 391

  Fly   262 RRWPPPSYETETEVGLPHERLFTIACSI----------------LNYRE----------MGKGKS 300
                      ..|..:...|.....||.                |.||:          ...|..
Mouse   392 ----------SDEGKVIRFRCKLCECSFNDRNARDMHLTGRRHRLQYRKKVDPTLPVAARPSGPI 446

  Fly   301 KKI-AKRLAAHRMWMRLQETPIDSGKISDSICGELEGEPRSSE 342
            ::: ||||..|  |.::| |.::..:..||...:.|...|..|
Mouse   447 QRVLAKRLQRH--WQQVQ-TQLEDTRRWDSELRQQEEHSRQPE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loqsNP_609646.1 DSRM_PRKRA-like_rpt1 134..206 CDD:380691 10/79 (13%)
DSRM_PRKRA-like_rpt2 250..316 CDD:380692 18/96 (19%)
DSRM_PRKRA-like_rpt3 393..463 CDD:380693
Zfr2NP_001030067.2 PHA03247 <24..312 CDD:223021 34/175 (19%)
ZnF_U1 205..232 CDD:197732 7/34 (21%)
C2H2 Zn finger 207..253 CDD:275371 13/63 (21%)
C2H2 Zn finger 254..276 CDD:275371 9/57 (16%)
zf-met 400..424 CDD:463736 3/23 (13%)
C2H2 Zn finger 402..424 CDD:275371 2/21 (10%)
DZF 586..837 CDD:295427
Blue background indicates that the domain is not in the aligned region.

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