DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9302 and Pdia2

DIOPT Version :9

Sequence 1:NP_609645.2 Gene:CG9302 / 34750 FlyBaseID:FBgn0032514 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001074539.1 Gene:Pdia2 / 69191 MGIID:1916441 Length:527 Species:Mus musculus


Alignment Length:514 Identity:111/514 - (21%)
Similarity:164/514 - (31%) Gaps:188/514 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 PSGDLPWEEDPAGKDV---------LHFSDAASFTKHLRKDIRPMLVMFYVPWCGFCKKMKPEYG 185
            ||..||  |:|.|::|         .|.:.:.:..:|     ..::|.||.||||.||::.|||.
Mouse    28 PSEVLP--EEPTGEEV
PKEDGILVLNHRTLSLALQEH-----SALMVEFYAPWCGHCKELAPEYS 85

  Fly   186 KASTELKTKGGYILAAMNVERQENAPIRKMFNITGFPTLIYFENGKLRFTYEGENNKEALVSFML 250
            ||:..|..:...:..| .|:......:.|.|.:.|:|||.:|:||.                 ..
Mouse    86 KAAALLAAESAVVTLA-KVDGPAEPELTKEFEVVGYPTLKFFQNGN-----------------RT 132

  Fly   251 NPNAKPTPKPKE--PEW-SADTNSEIVHL-TSQGFEPALKDEKSALVMFYAPWCGHCKRMKPEYE 311
            ||.....||..|  .|| .........|| ..:|.:..:......::.|:....|..........
Mouse   133 NPEEYAGPKTAEGIAEWLRRRVGPSATHLEDEEGVQALMAKWDMVVIGFFQDLQGKDMATFLALA 197

  Fly   312 KAALEMKQKKIPGLLAALDATKEPSIAEKYKVKGYPTVKF--FSNGVFKFEVN------------ 362
            |.||:|          ....|.:|.:.||:.:.....|.|  |..|...|.|:            
Mouse   198 KDALDM----------TFGFTDQPQLFEKFGLTKDTVVLFKKFDEGRADFPVDKETGLDLGDLSR 252

  Fly   363 ---------VRE----------ASKIV---------------EFMRDPKEPPPP----------- 382
                     |.|          |:||:               |.:.|.:|..||           
Mouse   253 FLVIHSMHLVTEFNSQTSPKIFAAKILNHLLLFVNQTLAQHRELLTDFREAAPPFRGQVLFVMVD 317

  Fly   383 ----------------------------------P------------------------------ 383
                                              |                              
Mouse   318 VAADNSHVLNYFGLKAEEAPTLRLINVETTKKYAPTGVIAITAASVAAFCQAVLHGEIKHYLLSQ 382

  Fly   384 --PPEKSWEEEEDSKEVLFLDDDNFSS-TLKRKKHALVMFYAPWCGHCKHTKPEFTAAATALQDD 445
              ||:  |    |...|..|...||.. .....|:..|.||||||.|||...|.:.|.|...:|.
Mouse   383 EIPPD--W----DQGPVKTLVSKNFEQVAFDETKNVFVKFYAPWCSHCKEMAPAWEALAEKYKDR 441

  Fly   446 PRIAFVAIDCT--KLAALCAKYNVRGYPTILYFSYLKTK--LDYNGGRTSKDFIAYMNN 500
            ..|....:|.|  :|.|    ::|.||||:.:|.....:  :||...|..:.|..::::
Mouse   442 EDIVIAELDATANELEA----FSVLGYPTLKFFPAGPDRKVIDYKSTRDLETFSKFLDS 496

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity