DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9302 and tmx4

DIOPT Version :10

Sequence 1:NP_609645.2 Gene:CG9302 / 34750 FlyBaseID:FBgn0032514 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001034826.1 Gene:tmx4 / 496882 XenbaseID:XB-GENE-992676 Length:366 Species:Xenopus tropicalis


Alignment Length:129 Identity:34/129 - (26%)
Similarity:57/129 - (44%) Gaps:25/129 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 ADTNSEIVHLTSQGFEPALKDEKSALVMFYAPWCGHCKRMKPEYE-----KAALEMKQKKIPGLL 326
            |...|.:..:||..:...|:.|  .::.||||||..|::::..:|     ..||.:|..|:    
 Frog    41 AQAESGVRAVTSTNWSALLEGE--WMIKFYAPWCPACQQIQSAWESFAERSHALGVKVGKV---- 99

  Fly   327 AALDATKEPSIAEKYKVKGYPTVKFFSNGVFKFEVNVREASKIVEFMRDPKEPPPPPPPEKSWE 390
               |.|:||.::.::.|...||:....:|||:.....|....:..|:           .||.||
 Frog   100 ---DVTEEPGLSGRFFVTTLPTIFHAKDGVFRRYHGSRMVEDLQTFI-----------SEKKWE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9302NP_609645.2 PDI_b_PDIR_N 24..131 CDD:239365
PDI_a_PDIR 144..249 CDD:239295
PDI_a_PDIR 272..373 CDD:239295 27/105 (26%)
PDI_a_PDIR 397..498 CDD:239295
tmx4NP_001034826.1 PDI_a_TMX 45..145 CDD:239292 29/119 (24%)
Blue background indicates that the domain is not in the aligned region.

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