DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9302 and pdia8

DIOPT Version :9

Sequence 1:NP_609645.2 Gene:CG9302 / 34750 FlyBaseID:FBgn0032514 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001003517.1 Gene:pdia8 / 445123 ZFINID:ZDB-GENE-040801-20 Length:493 Species:Danio rerio


Alignment Length:478 Identity:120/478 - (25%)
Similarity:184/478 - (38%) Gaps:140/478 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 DVLHFSDAASFTKHLRKDIRPMLVMFYVPWCGFCKKMKPEYGKASTELKTKGGYILAAMNVERQE 208
            |||..:| |.| .:|..:...:||.||.||||.|||:.||:..|::.|  ||...||  .|:...
Zfish    26 DVLKLTD-ADF-DYLAPEHETLLVKFYAPWCGHCKKLAPEFESAASRL--KGTVTLA--KVDCTA 84

  Fly   209 NAPIRKMFNITGFPTLIYFENGKLRFTYEGENNKEALVSFMLNPNAKPTPKPKEPE--------- 264
            |..|.|.:.:.|:|||..|.||:...:|:|..:.:.:|.:| ...|.|.......|         
Zfish    85 NTEICKHYGVNGYPTLKIFRNGQESSSYDGPRSADGIVDYM-KKQAGPDSVLLHSELDLEKFINH 148

  Fly   265 --------WSADTNSEIVH------LTSQGFEPALKDE----------KSALVMFYAPWCGHCKR 305
                    :|...:|::..      |..:.|..|...:          ..::::|.||      |
Zfish   149 FDASVVGLFSGTDSSQLAEFLKGASLMRESFRFAHTTDLQLGQKYGVTHESILLFRAP------R 207

  Fly   306 MKPEYEKAAL-------------------------------EMKQKKIPGLLAA---LDATKEPS 336
            :..::|::.:                               |:.:|:  .||.|   ||....|.
Zfish   208 LSSKFEESVVPHTGSLSVTGLRRFIRDNIFGLCPHMTKDNKEVLRKR--DLLTAYYDLDYLHNPK 270

  Fly   337 IAEKYKVKGYPTVKFFSNGVFKFEVNVREASKIVEFMR-----------DPKEPP-----PPPPP 385
            .:..::.:.......||:....|.|..|.     :||.           |..|.|     .....
Zfish   271 GSNYWRNRVLKVATKFSSQGMLFSVANRN-----DFMEELEEEFGLSASDGNELPFVTIRTRTGD 330

  Fly   386 EKSWEEE--EDSKEVLFLDDDNFSSTLKR------------------------------KKHALV 418
            :.|..||  .|.|.:....:|.|:..|||                              :|..|:
Zfish   331 KYSMREEFTRDGKSLESFLEDYFAGRLKRYVKSEPVPAINNGVVKVVVADTFEEIVNDPEKDVLI 395

  Fly   419 MFYAPWCGHCKHTKPEFTAAATALQDDPRIAFVAIDCTKLAALCAKYNVRGYPTILYFSYLKTKL 483
            .||||||||||..:|::||....|..||.|....:|.| :..:.|.|:|:|:||| ||:....|.
Zfish   396 EFYAPWCGHCKKLEPKYTALGEMLYSDPNIVIAKMDAT-VNDVPAGYDVQGFPTI-YFAAAGRKS 458

  Fly   484 D---YNGGRTSKDFIAYMNNPPT 503
            :   |.|.|..|||:.::....|
Zfish   459 EPKRYEGAREVKDFVNFLKREAT 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9302NP_609645.2 PDI_b_PDIR_N 24..131 CDD:239365
PDI_a_PDIR 144..249 CDD:239295 40/104 (38%)
ER_PDI_fam 166..500 CDD:273457 112/451 (25%)
PDI_a_PDIR 272..373 CDD:239295 21/150 (14%)
PDI_a_PDIR 397..498 CDD:239295 42/133 (32%)
pdia8NP_001003517.1 ER_PDI_fam 25..484 CDD:273457 120/478 (25%)
pdi_dom 30..129 CDD:273454 38/105 (36%)
PDI_b_ERp57 132..236 CDD:239367 11/109 (10%)
PDI_b'_ERp72_ERp57 240..353 CDD:239371 24/119 (20%)
PDI_a_PDI_a'_C 373..476 CDD:239293 37/104 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.