DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9302 and p4hb

DIOPT Version :9

Sequence 1:NP_609645.2 Gene:CG9302 / 34750 FlyBaseID:FBgn0032514 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_998529.3 Gene:p4hb / 406673 ZFINID:ZDB-GENE-080610-1 Length:509 Species:Danio rerio


Alignment Length:450 Identity:91/450 - (20%)
Similarity:125/450 - (27%) Gaps:223/450 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 EIVHLTSQGFEPALKDEKSALVMFYAPWCGHCKRMKPEYEKAALEMKQKKIPGLLAALDATKEPS 336
            :::.|....||.|||...:.||.||||||||||.:.|||.|||..:|.:.....||.:|||:|..
Zfish    23 DVLVLKKSNFEEALKAHPNVLVEFYAPWCGHCKALAPEYSKAAGMLKAEGSDIRLAKVDATEESE 87

  Fly   337 IAEKYKVKGYPTVKFFSNG---------------------------------------------- 355
            :|:::.|:||||:|||..|                                              
Zfish    88 LAQEFGVRGYPTIKFFKGGEKGNPKEYSAGRQAEDIVSWLKKRTGPAATTLNDVMQAESIIADNE 152

  Fly   356 -------------------------------------VF-KFEV--------------------- 361
                                                 || ||||                     
Zfish   153 VAVIGFFKDVESEDSKAFIKTAEAVDDIPFGITSDDSVFAKFEVAKDSVVLFKKFDEGRNTFDGE 217

  Fly   362 ----------------------------------------------------------------- 361
                                                                             
Zfish   218 VSKESLLNFIKANQLPLVIEFTEQTAPKIFGGDIKSHILMFVPKAAKDFQDKMDQFKKAAEGFKG 282

  Fly   362 ---------NVREASKIVEFMRDPKEPPP---------------PPPPEKSWE------------ 390
                     :|.:..:|:||....||..|               |...|.:.|            
Zfish   283 KILFIFIDSDVDDNQRILEFFGLKKEECPVIRLITLEEEMTKYKPESSEITAENIISFCTSFVEG 347

  Fly   391 ------------EEEDSKEVLFLDDDNFSS-TLKRKKHALVMFYAPWCGHCKHTKPEFTAAATAL 442
                        |:.|...|..|...||.. ......:..|.||||||||||...|.:.......
Zfish   348 TLKPHLMSQDIPEDWDKNPVKVLVGKNFEEVAFNPANNVFVEFYAPWCGHCKQLAPIWDQLGEKF 412

  Fly   443 QDDPRIAFVAIDCTKLAALCAKYNVRGYPTILYF--SYLKTKLDYNGGRTSKDFIAYMNN 500
            :|:..|....:|.|.......|  |..:||:.:|  ...:..:||||.||...|..::.:
Zfish   413 KDNANIVVAKMDSTANEIEAVK--VHSFPTLKFFPAGDERKVIDYNGERTLDGFTKFLES 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9302NP_609645.2 PDI_b_PDIR_N 24..131 CDD:239365
PDI_a_PDIR 144..249 CDD:239295
ER_PDI_fam 166..500 CDD:273457 91/448 (20%)
PDI_a_PDIR 272..373 CDD:239295 50/279 (18%)
PDI_a_PDIR 397..498 CDD:239295 32/103 (31%)
p4hbNP_998529.3 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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