DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9302 and pdi-1

DIOPT Version :9

Sequence 1:NP_609645.2 Gene:CG9302 / 34750 FlyBaseID:FBgn0032514 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_497746.1 Gene:pdi-1 / 175472 WormBaseID:WBGene00003962 Length:485 Species:Caenorhabditis elegans


Alignment Length:446 Identity:107/446 - (23%)
Similarity:169/446 - (37%) Gaps:113/446 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 MLVMFYVPWCGFCKKMKPEYGKASTELKTKGGYILAAMNVERQENAPIRKMFNITGFPTLIYFEN 229
            :||.||.|||..||.:.|:|.:|:..||.:|..|..| .|:..||..:...|.:.|:||::||::
 Worm    43 VLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLA-KVDATENQALASKFEVRGYPTILYFKS 106

  Fly   230 GKLRFTYEGENNKEALVSFMLNPNAKPTPKPKEPEWSADTNSEIVHLTSQGFEPALKDEKSALVM 294
            || ...|.|......:|.: :...:.||....|   |.:...|:...|........||.||....
 Worm   107 GK-PTKYTGGRATAQIVDW-VKKKSGPTVTTVE---SVEQLEELKGKTRVVVLGYFKDAKSDAAT 166

  Fly   295 FYAPWCGH--------------------------------------------------CKRMKPE 309
            .|......                                                  .|:....
 Worm   167 IYNEVADSVDDAFFAVAGSAEVAAAASLNEDGVALIRTDGDDSETSTIAEAEITNTIALKQWLHA 231

  Fly   310 YEKAAL-----EMKQKKIPG--------LLAALDATKEPSIAEKYKVKGYPTVKFFSNGVF-KFE 360
            |:.:|:     |..|:.:.|        ::...|::.:.:||:..:|    ..||.:..|| ..:
 Worm   232 YKLSAVTEFTHESAQEIVGGDLKKFHFLIIRKSDSSFDETIAKFTEV----AKKFRAKIVFVLLD 292

  Fly   361 VNVREASKIVEFMR-DPKEPPP-------------PPPPEKSWE--------------------- 390
            |:|.|.::|:||:. |.|..|.             .|...:.:|                     
 Worm   293 VDVEENARILEFLGVDAKNTPANRIVSLADQVEKFKPQEGEDFEAFTNSYLEGKSAQDLKAQDLP 357

  Fly   391 EEEDSKEVLFLDDDNFSS-TLKRKKHALVMFYAPWCGHCKHTKPEFTAAATALQDDPRIAFVAID 454
            |:.::..|..|...||:. .|...|...|.||||||||||...|.:...|...:.:|.:....:|
 Worm   358 EDWNALPVKVLVASNFNEIALDETKTVFVKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLD 422

  Fly   455 CTKLAALCAKYNVRGYPTI-LYFSYLKTKLDYNGGRTSKDFIAYMNNPPTSADRTE 509
            .| |..| |...|..:||: |:.:...|.:||:|.|..:.|..::|....||..:|
 Worm   423 AT-LNEL-ADVKVNSFPTLKLWPAGSSTPVDYDGDRNLEKFEEFVNKYAGSASESE 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9302NP_609645.2 PDI_b_PDIR_N 24..131 CDD:239365
PDI_a_PDIR 144..249 CDD:239295 31/83 (37%)
ER_PDI_fam 166..500 CDD:273457 103/434 (24%)
PDI_a_PDIR 272..373 CDD:239295 26/164 (16%)
PDI_a_PDIR 397..498 CDD:239295 35/102 (34%)
pdi-1NP_497746.1 ER_PDI_fam 23..474 CDD:273457 106/442 (24%)
pdi_dom 28..129 CDD:273454 31/88 (35%)
PDI_b_family 133..211 CDD:239279 9/80 (11%)
PDI_b'_family <263..343 CDD:239280 19/83 (23%)
PDI_a_PDI_a'_C 364..465 CDD:239293 35/102 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164186
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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