DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9302 and erp-44.1

DIOPT Version :9

Sequence 1:NP_609645.2 Gene:CG9302 / 34750 FlyBaseID:FBgn0032514 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001367560.1 Gene:erp-44.1 / 172191 WormBaseID:WBGene00016278 Length:411 Species:Caenorhabditis elegans


Alignment Length:195 Identity:59/195 - (30%)
Similarity:87/195 - (44%) Gaps:22/195 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 NSEIVHLTSQGFEPALKDEKSALVMFYAPWCGHCKRMKPEYEKAALEMKQKKIPG--LLAALDAT 332
            |:|:|.||||.||..::..:...|.|||.||...:.:||.:.:|:.:.|. ..||  :.|::||.
 Worm    34 NAEVVSLTSQNFEQTIQANELVFVNFYADWCRFSQMLKPIFLEASEKFKD-AAPGKIMWASVDAD 97

  Fly   333 KEPSIAEKYKVKGYPTVKFFSNG-VFKFEV-NVREASKIVEFMRDPKEPPPPPPPEKSWEEEEDS 395
            |...||.||.|..|||:|.|.|| ..|.|. :.|....:.||:....|.......||:..:...:
 Worm    98 KNNDIATKYHVNKYPTLKLFRNGEAAKREYRSSRSVEALSEFINKQMEVTVKKFIEKNALQAAHN 162

  Fly   396 KE----VLFLDDDNFSSTLKRKKHALVMFYAPWC------GHCKHTKPEFTAAATALQDDPRIAF 450
            .|    :.:..|:|  |...:....:.|||...|      |..     .|...|.|....|::.|
 Worm   163 PEKNTFIGYFHDEN--SVEYKNLMNVAMFYRDECEFMVGIGDL-----NFPGEAPAAGQPPKLVF 220

  Fly   451  450
             Worm   221  220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9302NP_609645.2 PDI_b_PDIR_N 24..131 CDD:239365
PDI_a_PDIR 144..249 CDD:239295
ER_PDI_fam 166..500 CDD:273457 59/195 (30%)
PDI_a_PDIR 272..373 CDD:239295 40/104 (38%)
PDI_a_PDIR 397..498 CDD:239295 14/64 (22%)
erp-44.1NP_001367560.1 PDI_a_ERp44 35..140 CDD:239294 40/105 (38%)
PDI_b_ERp44 148..245 CDD:239368 16/80 (20%)
PDI_b'_ERp44 256..366 CDD:239370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.