DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9302 and Pdia4

DIOPT Version :9

Sequence 1:NP_609645.2 Gene:CG9302 / 34750 FlyBaseID:FBgn0032514 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_446301.2 Gene:Pdia4 / 116598 RGDID:619835 Length:643 Species:Rattus norvegicus


Alignment Length:613 Identity:127/613 - (20%)
Similarity:201/613 - (32%) Gaps:257/613 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 EEDPAGKD-----------VLHFSDAASFTKHLRKDIRPMLVMFYVPWCGFCKKMKPEYGKASTE 190
            |||...:|           ||:..:..:|.    .|...:|:.||.||||.||:..|||.|.::.
  Rat    45 EEDEEDEDDLEVKEENGVWVLNDENFDNFV----ADKDTVLLEFYAPWCGHCKQFAPEYEKIAST 105

  Fly   191 LKTKGGYILAAMNVERQENAPIRKMFNITGFPTLIYFENGKLRFTYEGENNKEALVSFMLNPNAK 255
            ||.....| |...::....:.:...|:::|:||:...:.|: ...|:|...:|.:|:        
  Rat   106 LKDNDPPI-AVAKIDATSASMLASKFDVSGYPTIKILKKGQ-AVDYDGSRTQEEIVA-------- 160

  Fly   256 PTPKPKEPEWSADTNSEIVHLTSQGFEPALKDEKSALVMFYAPWCGHCKRMKPEYEKAALEMKQK 320
            ...:..:|:|:......:. ||.:.|:..:.:....||.||||||||||::.|||||||.|:.::
  Rat   161 KVREVSQPDWTPPPEVTLT-LTKENFDDVVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKR 224

  Fly   321 KIPGLLAALDATKEPSIAEKYKVKGYPTVKFFSNGVFKFEVN-VREASKIVEFMRDPKEPPPPP- 383
            ..|..||.:|||::..:|:::.|.||||:|.|..| ..|:.| .||...||::|.:...||... 
  Rat   225 SPPIPLAKVDATEQTDLAKRFDVSGYPTLKIFRKG-RPFDYNGPREKYGIVDYMVEQSGPPSKEI 288

  Fly   384 ----------------------------------------------------------------- 383
                                                                             
  Rat   289 LTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTFSTEIAKFLKVSLGKL 353

  Fly   384 ---PPEK---------------------------------------------------------- 387
               .|||                                                          
  Rat   354 VLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYSKRPLVVVYYS 418

  Fly   388 ------------SW-------------------EEEEDSKEV--------------LFLDD---- 403
                        .|                   :||:.:.||              ..||:    
  Rat   419 VDFSFDYRTATQFWRNKVLEVAKDFPEYTFAIADEEDYATEVKDLGLSESGEDVNAAILDESGKK 483

  Fly   404 -----DNFSSTLKR-------------------------------------------KKHALVMF 420
                 :.|.|...|                                           ||..|:.|
  Rat   484 FAMEPEEFDSDALREFVMAFKKGKLKPVIKSQPVPKNNKGPVRVVVGKTFDAIVMDPKKDVLIEF 548

  Fly   421 YAPWCGHCKHTKPEFTAAATALQDDPRIAFVAIDCTKLAALCAKYNVRGYPTILYFS---YLKTK 482
            |||||||||..:|.:|:.....:....:....:|.|.......:|.|.|:||| ||:   ..|..
  Rat   549 YAPWCGHCKQLEPVYTSLGKKYKGQKDLVIAKMDATANDITNDRYKVEGFPTI-YFAPSGDKKNP 612

  Fly   483 LDYNGGRTSKDFIA-YMNNPPTSADRTE 509
            :.:.||....:.:: :::...|...||:
  Rat   613 IKFEGGNRDLEHLSKFIDEHATKRSRTK 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9302NP_609645.2 PDI_b_PDIR_N 24..131 CDD:239365
PDI_a_PDIR 144..249 CDD:239295 31/115 (27%)
ER_PDI_fam 166..500 CDD:273457 116/562 (21%)
PDI_a_PDIR 272..373 CDD:239295 44/101 (44%)
PDI_a_PDIR 397..498 CDD:239295 35/170 (21%)
Pdia4NP_446301.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..58 4/12 (33%)
pdi_dom 65..166 CDD:273454 29/114 (25%)
CXXC. /evidence=ECO:0000250|UniProtKB:P08003 89..92 2/2 (100%)
ER_PDI_fam 175..635 CDD:273457 88/462 (19%)
CXXC. /evidence=ECO:0000250|UniProtKB:P08003 553..556 2/2 (100%)
Prevents secretion from ER 640..643 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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