DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6565 and Stard10

DIOPT Version :9

Sequence 1:NP_001285891.1 Gene:CG6565 / 34749 FlyBaseID:FBgn0032513 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001013087.1 Gene:Stard10 / 293150 RGDID:1306548 Length:290 Species:Rattus norvegicus


Alignment Length:239 Identity:56/239 - (23%)
Similarity:95/239 - (39%) Gaps:39/239 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 QPSTSKEAETDPDTSISNCLRPLDLDVRNAPAGTVRIQAQDDQKWEPYFSKNEFSIWRRQERSSL 212
            :|:..:|:...||          |.|.|     :.|.:.:.:..|...:||...|:|.:......
  Rat    14 RPALGRESVQVPD----------DQDFR-----SFRSECEAEVGWNLTYSKAGVSVWVQAVEMDR 63

  Fly   213 YSYKVYARFD--DITADDFLHVQTDLDYRRQWDDTALRLELISEDPVPGSNSHLIYWEMQWPRLF 275
            ..:|:..|.:  |:.|:....|..|::||::||...:....|:...|   |:.:.|:..:.|:..
  Rat    64 TLHKIKCRMECCDVPAETLYDVLHDIEYRKKWDSNVIETFDIARLTV---NADVGYYSWRCPKPL 125

  Fly   276 ANRDYVYCRRYIKDDNKKLIFICNRGATHNTYPALSGKVRVTDYWSLMVIKPFRGFHEPG-LHFV 339
            .|||.:..|.::......:|.  |....|..||.....||.....:..:|:      ..| ...|
  Rat   126 KNRDVITLRSWLPMGADYIIM--NYSVKHPKYPPRKDLVRAVSIQTGYLIQ------STGPKSCV 182

  Fly   340 LTYFD--DPGIPIPQNIKSWVTQKQ----MPEFLTKMYVATKNY 377
            :||..  ||...:|:    ||..|.    .|:.:.|||.|...|
  Rat   183 ITYLAQVDPKGSLPK----WVVNKSSQFLAPKAMKKMYKACIKY 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6565NP_001285891.1 START_STARD7-like 170..377 CDD:176920 51/215 (24%)
Stard10NP_001013087.1 START_STARD10-like 19..241 CDD:176880 55/234 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2761
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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