DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bdp1 and bdp1

DIOPT Version :9

Sequence 1:NP_609643.2 Gene:Bdp1 / 34748 FlyBaseID:FBgn0032512 Length:695 Species:Drosophila melanogaster
Sequence 2:XP_002934881.3 Gene:bdp1 / 100491494 XenbaseID:XB-GENE-6464887 Length:2379 Species:Xenopus tropicalis


Alignment Length:865 Identity:184/865 - (21%)
Similarity:307/865 - (35%) Gaps:262/865 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IKRKPRR--EELPTAKKED-EEEEAVVVEAEAESPPVASTPAAELELEADAIAFKMPASSAGQLE 78
            |...|.|  :|.|....|. |::..|.|...||:....:..||                      
 Frog    33 IATDPNRASQEPPCPNHETVEKDNGVAVSDVAETEGATTVSAA---------------------- 75

  Fly    79 EVFHSDLEDNVIQMDLQKTTNGFPMS-PSKAQARQRVRPTPVFGQRRNSF-----VGSPMAS--- 134
                :|..|:.:|.:.:|.|.....: |:.|:.:.....||:  |||..|     :|.|..|   
 Frog    76 ----ADRGDSFVQEEEEKGTGLCKHAVPTGAEVQACATSTPL--QRRKRFATLPNIGKPRVSIPS 134

  Fly   135 --------------------------------DYEGDYQSPATPTRRERYLSGSSSG-------T 160
                                            ..|..::.|..|...:..|....:.       |
 Frog   135 AVTTLPLKASQGDIPIAVPSIGVAEAATPEKAKLESSFKIPTPPNISQASLPEKRTPVPQVPQFT 199

  Fly   161 PLQQQVHSPMPPSPYKYLPP----------ASPGMGRI-------RTESTCSTYSEGG------S 202
            |.::.|......||.|.:.|          ..|..|..       :|:|:......|.      .
 Frog   200 PFKKPVLKQPEVSPVKAVEPLPKDDLFPLKERPSQGSCISGEFLKKTKSSPLKKVAGNLEKERLK 264

  Fly   203 KQRKGDDRSQSQIGQRLNARRD-FETRFNKGVPDKSTFKMMDMIFYNPENNPMVPKQS------- 259
            :.||..|..:.::.:...|.:: |.:.......|:|...|.|.:.|.||||||....|       
 Frog   265 RARKLRDLLRDELRKERRASKEKFTSVDYSDEIDRSKMTMRDFVHYIPENNPMTSSISDKNTSDK 329

  Fly   260 VTTIKDESGGDDSKPAVSQ----LLEPKGESTSAMLVPQLKLDANGEMIIDEKTLEIETTAEVEA 320
            ..|::..|.|.:.|.|..:    |.|.:.|  ..:|||::|:..:|.:|:||::|    |.||..
 Frog   330 PATVESPSAGSEMKSAPREDEDDLDEEEDE--GPLLVPRVKVAEDGSIILDEESL----TVEVSR 388

  Fly   321 RK--VLANSSLILMDETTGDNGFYKRHKRTPYWTSDETVRFYRSLQIIGTDFSLMCQMFPTRSRR 383
            .|  ::.|...|....:|.....:::.|.:..|:..||..|:.::.::|||||::..:||.|.|.
 Frog   389 TKGPIVENGDPIFERGSTTTYTSFRKSKYSKPWSEKETDMFFLAISMVGTDFSMITHLFPHRQRI 453

  Fly   384 DLKLKYKKEERTNGQLINKALLYPKAFNIQELKDQLE-----EEDREREENDRKWREIARALPGN 443
            ::|.|:|:|||.||..|:||....|||:.|...:.||     |..:.:.....|    |:...||
 Frog   454 EIKNKFKREERLNGWRIDKAFREKKAFDQQLFAELLERALIQEVKKPKAPKTPK----AKGEKGN 514

  Fly   444 PKKRSRVQQQSKAS------------RALNDGDVVYENEHVTS------TKL-GKHAWAKRRK-- 487
            ..::.|.:|:.|||            .|::.|....|||...:      |.| ||...|:::|  
 Frog   515 KPRKPRKKQKDKASAEQDSNLGDPEVEAVDSGTAEKENEESQTVIGDEPTPLPGKKKRARKKKNE 579

  Fly   488 -----------------------------------------------------ELETDENDGSAP 499
                                                                 |:||.|.:.|..
 Frog   580 AQSVEPEDLSECQNKPSTLPAKEGKSRKKILIPLIGKGEALDISADPETVDPTEMETAEGEESVD 644

  Fly   500 AKR--KPKAKRRSPK----VSVPAATESLSDVAAIKQEKTIKTEQTSSHL-------------PT 545
            |::  :.|.|||..|    |...:..:|.|||..|.:|:...:::.::.|             .|
 Frog   645 AEKIQEKKKKRRQKKKPIIVESDSECQSGSDVLHIAEEEDSGSKEFNATLDSSVESCDQSVQEAT 709

  Fly   546 GGELQAELNGLLMDDPVEYDVDVNKPRDKTIINMDDGTLS-YVSDVEPAPETPNRKAETYLINFI 609
            .|...|....:|..|                 :.|||||. |..|.:...|..:.:.:|.:.|  
 Frog   710 EGSTNAVAEEILSGD-----------------DGDDGTLEPYEDDDDDGDELLSMQEDTLVSN-- 755

  Fly   610 EDQDHELITPDD---------PIPPSTTEPDIEQILAELAEGSLALVSSLDPEHEDRVLNEIYML 665
             :||..::...|         .|..:..|....:.|.|..:..:.:.::..|:..|        :
 Frog   756 -EQDSVVLLASDISLFDNSSISIADTQVETSPVESLQEATDHKMTVSTTEKPQECD--------I 811

  Fly   666 DKKTGELCETPLKIPEHIVQ 685
            .:.:|.....|....:..:|
 Frog   812 QEDSGARTREPSASEDEFIQ 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bdp1NP_609643.2 Myb_DNA-bind_7 345..419 CDD:292585 29/73 (40%)
SANT 350..395 CDD:197842 18/44 (41%)
bdp1XP_002934881.3 Myb_DNA-bind_7 411..491 CDD:406388 30/79 (38%)
rad2 <691..>1077 CDD:273166 28/169 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I9707
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005120
OrthoInspector 1 1.000 - - oto104326
Panther 1 1.100 - - LDO PTHR22929
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.100

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