DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCAF8L2 and adpr-1

DIOPT Version :9

Sequence 1:NP_001340377.1 Gene:DCAF8L2 / 347442 HGNCID:31811 Length:631 Species:Homo sapiens
Sequence 2:NP_001021829.1 Gene:adpr-1 / 3565128 WormBaseID:WBGene00044440 Length:558 Species:Caenorhabditis elegans


Alignment Length:534 Identity:113/534 - (21%)
Similarity:176/534 - (32%) Gaps:205/534 - (38%)


- Green bases have known domain annotations that are detailed below.


Human   189 VVTALHQRQLGSR--PRFVYEACGARAFVQRFRLQYRLADHVGCVNTVHFNQRGTRLASSGDDLK 251
            :::||.:|....|  |.|. :.......|......:.|..|.|||||:.:|:.|..|||..||..
 Worm     1 MISALERRYENLRFGPLFP-DILNEDRLVDSLESFHMLEGHSGCVNTLRWNKTGALLASGSDDRN 64

Human   252 VIVWDWVRQRPVLNFESGHTNNVFQAKFLPNCGDSTLAMCARDGQVRVAEL--INASYFNNTK-- 312
            |.:|.  ..|.:.|..:||..|||..:||.|.||..|...|.|   ||..|  |.||.....:  
 Worm    65 VKIWK--SGREIHNLVTGHEGNVFAVEFLQNSGDQKLVTGAAD---RVVALHDIEASTCKKWELD 124

Human   313 ------CVAQHRGPAHKLALEPDSPYKFLTSGEDAVVFTIDLRQDRPASKVVVTRENDKKV-GLY 370
                  |..:|.......|:|.|:.           |...|.|.:.|  :|::....|::. ...
 Worm   125 GRVKRICTVEHDPTLFWAAVECDNG-----------VQQFDTRTENP--EVIIRHTADREFHDAK 176

Human   371 TITVNPANTYQFAVGGQDQFVRIYDQRKIDKKENNGVLKKFTP-------HHLVNCDFPTNITCV 428
            ::.|:.|......||..:..||:||:|.:     |..:..|:|       :|..:..|....|.|
 Worm   177 SVAVSEARPNLIVVGFDETAVRLYDRRNL-----NAPMLTFSPLGANTYAYHATHVAFNKRGTEV 236

Human   429 VYSHDG----------TELLASYND---------------------------------------- 443
            |.:|.|          .||...|.|                                        
 Worm   237 VVNHGGGGGVYVFSVDAELDPKYMDRFHSVMELPREPVITSGALPYPDLREIGSTAIREKHFAKA 301

Human   444 -----DDIY-------------LFNSSHSDGA--------------------------------- 457
                 |.||             ..:..||:.|                                 
 Worm   302 IDFYSDLIYRNDDRESHQDHRAFLSVCHSNRATALLLRRQRGDTYACVRDCIKALEIHRGNSKAL 366

Human   458 ----------------------------------------------------------QYSKRFK 464
                                                                      .|.:|:.
 Worm   367 LRLIKSFTTMEHIGLARKCVQKFKEWYPNDTAIEKMEEDVEALTPNDRPELVAPEGVVDYQERYG 431

Human   465 GHRNN-TTVKGVNFYGPRSEFVVSGSDCGHIFFWEKSSCQIIQFLKGSREGTINCLEPHPYLPVL 528
            |..|: |.:|..||:|.|.:::::||||||::.|.:.:.: ||.:..:.:..:|..:|||...::
 Worm   432 GSTNHQTDIKEANFFGSRDQYIIAGSDCGHMYIWNRDTSK-IQGIFEADDHILNICQPHPDQFMI 495

Human   529 ACSGLDHDVKIWTP 542
            |.:|:|.|:.:|.|
 Worm   496 ATAGIDDDILLWQP 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCAF8L2NP_001340377.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..91
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..163
WD40 224..540 CDD:330360 104/493 (21%)
WD 1 226..265 16/38 (42%)
WD40 repeat 233..269 CDD:293791 12/35 (34%)
WD 2 269..310 19/42 (45%)
WD40 repeat 275..316 CDD:293791 16/50 (32%)
WD 3 316..356 8/39 (21%)
WD40 repeat 321..362 CDD:293791 8/40 (20%)
WD 4 364..404 10/40 (25%)
WD40 repeat 370..418 CDD:293791 13/54 (24%)
WD 5 420..459 16/197 (8%)
WD40 repeat 425..464 CDD:293791 17/197 (9%)
WD 6 467..507 15/40 (38%)
WD40 repeat 472..509 CDD:293791 14/36 (39%)
WD 7 511..550 10/32 (31%)
WD40 repeat 516..540 CDD:293791 8/23 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 594..631
adpr-1NP_001021829.1 WD40 <37..201 CDD:392136 54/181 (30%)
WD40 repeat 45..80 CDD:293791 13/36 (36%)
WD40 repeat 85..124 CDD:293791 16/41 (39%)
WD40 repeat 132..171 CDD:293791 10/51 (20%)
WD40 repeat 178..213 CDD:293791 10/39 (26%)
TPR repeat 285..310 CDD:276809 1/24 (4%)
TPR repeat 315..358 CDD:276809 3/42 (7%)
TPR repeat 363..388 CDD:276809 0/24 (0%)
WD40 <436..>507 CDD:392136 23/71 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1334
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270484at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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