DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and Hgfac

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_445772.1 Gene:Hgfac / 58947 RGDID:70909 Length:653 Species:Rattus norvegicus


Alignment Length:320 Identity:96/320 - (30%)
Similarity:150/320 - (46%) Gaps:63/320 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 VPSTKRTTPRPTSPARPTTTRRPTYPSYPSPVTTTTTTRRPVSGTSSEGLPLQCGNKNPVTPDQE 398
            :|....|.|..||.||||..:|....::..|                                  
  Rat   374 IPEVLATLPESTSTARPTCGKRHKKRTFLRP---------------------------------- 404

  Fly   399 RIVGGINASPHEFPWIAVLFKSGKQFCGGSLITNSHILTAAHCVARMTSWDVAALTAHLGD--YN 461
            ||:||.::.|...||:|.:: .|..||.|||:....:::||||.:.....|  ::|..||.  :|
  Rat   405 RIIGGSSSLPGSHPWLAAIY-IGNGFCAGSLVHTCWVVSAAHCFSSSPPRD--SITVVLGQHFFN 466

  Fly   462 IGTDFEVQHVSRRIKRLVRHKGFE-FSTLHNDVAILTLSEP----VPFTREIQPICLPTSPSQQS 521
            ..||......   |::.|.:..:. |:...:|:.::.|.:.    ...::.:||||||.:.|   
  Rat   467 RTTDVTQTFA---IEKYVPYTLYSVFNPNDHDLVLIRLKKKGERCAVRSQFVQPICLPEAGS--- 525

  Fly   522 RSY-SGQVATVAGWGSLREN--GPQPSILQKVDIPIWTNAECA--RKYGRAAPGGIIESMICAG- 580
             |: :|....:||||.:.||  |...|:|:.: :|:..:.:|:  ..||    ..|..:|:||| 
  Rat   526 -SFPTGHKCQIAGWGHMDENVSGYSNSLLEAL-VPLVADHKCSSPEVYG----ADISPNMLCAGY 584

  Fly   581 -QAAKDSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWIYKNIK 639
             ....|:|.||||||:|....|.....||:|||.|||:...|||||||::.:.||...|:
  Rat   585 FDCKSDACQGDSGGPLVCEKNGVAYLYGIISWGDGCGRLNKPGVYTRVSNYVDWINDRIR 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628 11/41 (27%)
Tryp_SPc 400..637 CDD:238113 83/250 (33%)
HgfacNP_445772.1 FN2 99..145 CDD:128373
EGF_CA 159..194 CDD:238011
FN1 197..237 CDD:238018
EGF 242..274 CDD:394967
Kringle 283..364 CDD:395005
Tryp_SPc 406..641 CDD:238113 83/249 (33%)
Blue background indicates that the domain is not in the aligned region.

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