DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)k05911 and LOC5667955

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_001689275.2 Gene:LOC5667955 / 5667955 VectorBaseID:AGAMI1_001242 Length:262 Species:Anopheles gambiae


Alignment Length:271 Identity:85/271 - (31%)
Similarity:133/271 - (49%) Gaps:43/271 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 VSGTSSEGLPLQCGNKNPVTPDQERIVGGINASPHEFPWIAVLFKS--GKQFCGGSLITNSHILT 437
            |||.|:...||....|.       |||||..|...:||:.| .|::  |...|||:::....::|
Mosquito    18 VSGESATSDPLYQQWKG-------RIVGGTYARDGDFPYQA-SFRTLDGMHICGGAVLNQQWVIT 74

  Fly   438 AAHCVARMTSWD----VAALTAHLGDYNIGTDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTL 498
            ||.|:...::.|    |.|.....|.:|:|           ::|:|.|..|..:||.||||:..:
Mosquito    75 AASCLFGRSTADTRVVVGAYRLSQGGFNLG-----------LRRIVIHPNFASATLANDVAVARV 128

  Fly   499 SEPVPFTREIQPICLPTSPSQQSRSYSGQV---ATVAGWGSLRENGPQ-PSILQKVDIPIWTNAE 559
            ::.:..:..:|.:        |..||:..|   |.|:|||.:..:.|| |..||.:.:.:.:..|
Mosquito   129 AQQMVLSDAVQGV--------QLGSYNINVAYGALVSGWGRIEFSNPQFPDNLQYIAVNVISQLE 185

  Fly   560 CARKYGRAAPGGIIESMICAGQ-AAKDSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGV 623
            |..::.......|.:|.:|:.. ..:.:|.||:|.|::  .|....  |||||||.||:| ||.|
Mosquito   186 CRARFAAPYDARIYDSTMCSSSPVGQGTCLGDAGSPLI--HGAELH--GIVSWGIPCGEG-YPDV 245

  Fly   624 YTRVTSLLPWI 634
            |.|::|...||
Mosquito   246 YARISSHRGWI 256

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829