DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and cfd

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001018368.1 Gene:cfd / 553553 ZFINID:ZDB-GENE-050522-411 Length:249 Species:Danio rerio


Alignment Length:241 Identity:77/241 - (31%)
Similarity:113/241 - (46%) Gaps:24/241 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 IVGGINASPHEFPWIAVLFKSGKQFCGGSLITNSHILTAAHCVA-RMTSWDVAALTAH--LGDYN 461
            |.||..|..|..|::|.:..:||..|||.||::..:::||||.. ..||.....|.||  .|..:
Zfish    21 ITGGQEAKAHSRPYMASVQWNGKHECGGFLISSQWVMSAAHCFQDGRTSGVKVVLGAHSLSGAED 85

  Fly   462 IGTDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPICLPTSPSQQSRSYSG 526
            ....|:.:        :..|..|..|...||:|::.|.:||..:..::|:......:...:  ..
Zfish    86 TKQTFDAE--------VYNHPDFSISNYDNDIALIKLDKPVTQSDAVKPVKFQRDETADPK--EA 140

  Fly   527 QVATVAGWGSLRENGPQPSILQKVDIPIWTNAECARK--YGRAAPGGIIESMICAGQAAKDSCSG 589
            .|...||||||...|.:|..|.::.||:.....|.|.  ||..    ...:|:||....||:|.|
Zfish   141 AVVETAGWGSLNNMGGRPDKLHELSIPVMERWRCGRADFYGEK----FTSNMLCAADKRKDTCDG 201

  Fly   590 DSGGPMVINDGGRYTQVGIVS-WGIGCGKGQYPGVYTRVTSLLPWI 634
            |||||::.    |...|||.| .|..||..:.||:||.::....||
Zfish   202 DSGGPLLY----RGIVVGITSNGGKKCGSSRKPGLYTIISHYASWI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 77/241 (32%)
cfdNP_001018368.1 Tryp_SPc 21..246 CDD:238113 77/241 (32%)
Blue background indicates that the domain is not in the aligned region.

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