DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and Hgfac

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_006504094.1 Gene:Hgfac / 54426 MGIID:1859281 Length:658 Species:Mus musculus


Alignment Length:280 Identity:87/280 - (31%)
Similarity:137/280 - (48%) Gaps:49/280 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 CGNKNPV-TPDQERIVGGINASPHEFPWIAVLFKSGKQFCGGSLITNSHILTAAHCVARMTSWDV 450
            ||.::.. |..:.||:||.::.|...||:|.:: .|..||.|||:....:::||||.|.....| 
Mouse   392 CGKRHKKRTFLRPRIIGGSSSLPGSHPWLAAIY-IGNSFCAGSLVHTCWVVSAAHCFANSPPRD- 454

  Fly   451 AALTAHLGDYNIGTDFEVQHVSRRIKRLVRHKGFE----------FSTLHNDVAILTLSEP---- 501
             ::|..||          ||...|...:.:..|.|          |:..::|:.::.|.:.    
Mouse   455 -SITVVLG----------QHFFNRTTDVTQTFGIEKYVPYTLYSVFNPNNHDLVLIRLKKKGERC 508

  Fly   502 VPFTREIQPICLPTSPSQQSRSY-SGQVATVAGWGSLRE-------NGPQPSILQKVDIPIWTNA 558
            ...::.:||||||.:.|    |: :|....:||||.:.|       :....|:|:.: :|:..:.
Mouse   509 AVRSQFVQPICLPEAGS----SFPTGHKCQIAGWGHMDEMQSSTDVSSYSNSLLEAL-VPLVADH 568

  Fly   559 ECA--RKYGRAAPGGIIESMICAG--QAAKDSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQ 619
            :|:  ..||    ..|..:|:|||  ....|:|.||||||:|....|.....||:|||.|||:..
Mouse   569 KCSSPEVYG----ADISPNMLCAGYFDCKSDACQGDSGGPLVCEKNGVAYLYGIISWGDGCGRLN 629

  Fly   620 YPGVYTRVTSLLPWIYKNIK 639
            .|||||||.:.:.||...|:
Mouse   630 KPGVYTRVANYVDWINDRIR 649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 82/262 (31%)
HgfacXP_006504094.1 FN2 99..145 CDD:128373
EGF_CA 159..194 CDD:238011
FN1 197..237 CDD:238018
EGF_CA 242..275 CDD:238011
Kringle 283..364 CDD:395005
Tryp_SPc 406..646 CDD:238113 82/261 (31%)
Blue background indicates that the domain is not in the aligned region.

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