DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and ctrl

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001004582.1 Gene:ctrl / 447843 ZFINID:ZDB-GENE-040912-147 Length:261 Species:Danio rerio


Alignment Length:261 Identity:92/261 - (35%)
Similarity:130/261 - (49%) Gaps:18/261 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 VSGTSSEGLPLQCGNKNPVTPDQERIVGGINASPHEFPW-IAVLFKSGKQFCGGSLITNSHILTA 438
            |:.|...|:|.    ..||.....|||.|.||....:|| :::...:|..|||||||....::||
Zfish    11 VASTLGCGVPA----IKPVISGYNRIVNGENAVSGSWPWQVSLQQSNGFHFCGGSLINQYWVVTA 71

  Fly   439 AHCVARMTSWDVAALTAHLGDYNIGTDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVP 503
            |||..:.....|.     ||:::.|:..|...| :.|.:.:.|..:.....:||:.:|.||.|..
Zfish    72 AHCRVQAGYHYVI-----LGEHDRGSSAESVQV-KSIAKAITHPYYNSQNFNNDITLLKLSSPAQ 130

  Fly   504 FTREIQPICLPTSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAECARKYGRAA 568
            .|..|.|:||..|.:...   ||......|||...... .|.|||:..:|:.:.|:|.:.:|:  
Zfish   131 LTSRISPVCLAASSTSIP---SGTRCVTTGWGKTGSTS-SPRILQQTALPLLSPAQCKQYWGQ-- 189

  Fly   569 PGGIIESMICAGQAAKDSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPW 633
             ..|.::|||||.:...||.||||||:|....|.:.||||||||......:.|.||.||:.|..|
Zfish   190 -NRITDAMICAGASGVSSCQGDSGGPLVCESSGAWYQVGIVSWGTSDCNVRTPAVYARVSYLRQW 253

  Fly   634 I 634
            |
Zfish   254 I 254

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829