DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and CG11842

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster


Alignment Length:310 Identity:95/310 - (30%)
Similarity:135/310 - (43%) Gaps:65/310 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   367 TTTTTRRPVSGTSS------EGLPL------QCGNKNPVTPDQERIVGGINASPHEFPWIAVLFK 419
            |.|..:|.|...:|      |..|:      :|.:..|:      |:||..|.|.|||..|.|..
  Fly    34 TCTAYKRSVWEETSEFSFLIENAPIIYKTLDKCTSYAPL------IIGGGPAVPKEFPHAARLGH 92

  Fly   420 SGKQ-----FCGGSLITNSHILTAAHC-VARMTSWDVAALTAHLGDYNIGT--------DFEVQH 470
            ..:.     ||||:||::.|:|||||| .:...|.::    |.|||....|        ||:|  
  Fly    93 KDENGEVEWFCGGTLISDRHVLTAAHCHYSPQGSVNI----ARLGDLEFDTNNDDADPEDFDV-- 151

  Fly   471 VSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPICLPTSPSQQSRSYSGQVATVAGWG 535
                 |....|..|.:..::||::::.||.||.|.....|.|||....:...|:     ...|||
  Fly   152 -----KDFTAHPEFSYPAIYNDISVVRLSRPVTFNDYKHPACLPFDDGRLGTSF-----IAIGWG 206

  Fly   536 SLR-----ENGPQPSILQKVDIPIWTNAEC---ARKYGRAAPGGIIESMICAG-QAAKDSCSGDS 591
            .|.     ||    ..||||.:..: ...|   |.:......|....:.:|.| ...||:|:|||
  Fly   207 QLEIVPRTEN----KKLQKVKLYNY-GTRCRITADRNDELPEGYNATTQLCIGSNEHKDTCNGDS 266

  Fly   592 GGPMVI---NDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWIYKNI 638
            |||::|   :....|..:||.|.|:.|.....|.:||||...|.||.:.:
  Fly   267 GGPVLIYHMDYPCMYHVMGITSIGVACDTPDLPAMYTRVHFYLDWIKQQL 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628 3/8 (38%)
Tryp_SPc 400..637 CDD:238113 86/262 (33%)
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 86/262 (33%)
Blue background indicates that the domain is not in the aligned region.

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