DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and CG5909

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster


Alignment Length:330 Identity:102/330 - (30%)
Similarity:155/330 - (46%) Gaps:56/330 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 RPTTTRRPTY---PSYPSPVTTTTTTRRPVSGTSS-------EGLPL-----QCGNK-NPVTPDQ 397
            |.||..|..:   |:...|.:...:.|:.|.....       :||.|     .|||| ||     
  Fly    69 RSTTNTRDFHLCCPNEAPPQSNQESQRKVVRSEGGNLNRYDRQGLQLLNSVTNCGNKGNP----- 128

  Fly   398 ERIVGGINASPHEFPWIAVL---FKSGKQF-CGGSLITNSHILTAAHCVARMTSWDVAALTAHLG 458
             ::.||..|.|.:|||:|:|   ....:.| ||||||:..||||||||:.....    .:...||
  Fly   129 -KVSGGKTARPGDFPWVALLKYKINDPRPFRCGGSLISERHILTAAHCIIDQPE----VIAVRLG 188

  Fly   459 DYNIGTDFEVQHVSRR------------IKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPI 511
            ::::.::.:..::...            |:::..|..:....:.:||||:.|...|.....|:|:
  Fly   189 EHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVAIIKLDRVVKEKSHIKPV 253

  Fly   512 CLPTSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAECARKYGRAAPGGIIESM 576
            |||.....|...:. |...|||||. .|.....:.||:..|...:..||.:.|.:   |.:.::.
  Fly   254 CLPIDQKSQELDFD-QSFFVAGWGG-TEKETVATKLQQALITRKSLNECRQYYNK---GEVSDNH 313

  Fly   577 ICA-GQAAKDSCSGDSGGPMV----INDGGRYTQVGIVSWGIG--CGKGQYPGVYTRVTSLLPWI 634
            ||| |...|.:|.||||||:.    ..:..|..|.|:||:| |  ||:.| |||:..|..:||||
  Fly   314 ICATGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFG-GRLCGQNQ-PGVFASVIDMLPWI 376

  Fly   635 YKNIK 639
            .:|::
  Fly   377 TQNLQ 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628 7/29 (24%)
Tryp_SPc 400..637 CDD:238113 84/259 (32%)
CG5909NP_651544.1 CLIP 25..82 CDD:197829 4/12 (33%)
Tryp_SPc 132..379 CDD:238113 84/257 (33%)
Blue background indicates that the domain is not in the aligned region.

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