DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and CG17477

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster


Alignment Length:250 Identity:74/250 - (29%)
Similarity:110/250 - (44%) Gaps:44/250 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 IVGGINASPHEFPW-IAVLFKSGKQFCGGSLITNSHILTAAHCVARMTSWDVAALTAHLGDYNIG 463
            ||||.||:..:.|: :::....|...|||::|::..|:||.|||   ..:..:.|....|.....
  Fly    27 IVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHCV---KGYPTSRLQVATGTIRYA 88

  Fly   464 TDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPICLPTSPSQQSRSYSGQV 528
            ....|.:..    .:..|..::.....||:.:|.|:|.:.|....|.:.|||||.  .|..|..|
  Fly    89 EPGAVYYPD----AIYLHCNYDSPKYQNDIGLLHLNESITFNALTQAVELPTSPF--PRGASELV 147

  Fly   529 ATVAGWGSLRENGPQPSILQKVDIPIWTNAECARKYGRAAPGGIIESM-------------ICA- 579
            .|  ||||....|..||.||:|......:..|             |||             ||| 
  Fly   148 FT--GWGSQSAAGSLPSQLQRVQQQHLNSPAC-------------ESMMSAYEDLELGPCHICAY 197

  Fly   580 GQAAKDSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWI 634
            .||...:|.||||||:| :.|   |.|||:::.:.|.:| .|.::..:.....|:
  Fly   198 RQANIGACHGDSGGPLV-HQG---TLVGILNFFVPCAQG-VPDIFMNIMYYRDWM 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 74/249 (30%)
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 74/249 (30%)
Blue background indicates that the domain is not in the aligned region.

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