DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)k05911 and LPA

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_005568.2 Gene:LPA / 4018 HGNCID:6667 Length:2040 Species:Homo sapiens


Alignment Length:712 Identity:174/712 - (24%)
Similarity:246/712 - (34%) Gaps:233/712 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 PGEGSKCLTSRGQPGVCVRIDGCRQYYR--LARQISIFTLRQW---------------PQANGLG 152
            |.|.:....|.|... |.|.||  |.||  |:..|:..|.:.|               |.|   |
Human  1373 PSEEAPTENSTGVQD-CYRGDG--QSYRGTLSTTITGRTCQSWSSMTPHWHRRIPLYYPNA---G 1431

  Fly   153 LNGNMCNFFDMLGRVNNGICCTDIDAN----SFGVFPLPGTTTTTTTTTEMPSVVADEEDREHVI 213
            |..|.|...|...|.    .|..:|.:    ...:...|.|.::..||..:..|.:.|...|...
Human  1432 LTRNYCRNPDAEIRP----WCYTMDPSVRWEYCNLTRCPVTESSVLTTPTVAPVPSTEAPSEQAP 1492

  Fly   214 PEGE--VEGVYPPD-----------------------VP----RPEEPIDNANSVED---TPD-- 244
            ||..  |:..|..|                       :|    |..|...||...|:   .||  
Human  1493 PEKSPVVQDCYHGDGRSYRGISSTTVTGRTCQSWSSMIPHWHQRTPENYPNAGLTENYCRNPDSG 1557

  Fly   245 ---------------FQDINTIEGNPPGADKKPEAEPV--------GEPVEQ-PISTQPASTIH- 284
                           :.::........|..:.|...||        ..|.|| |:..|   ..| 
Human  1558 KQPWCYTTDPCVRWEYCNLTQCSETESGVLETPTVVPVPSMEAHSEAAPTEQTPVVRQ---CYHG 1619

  Fly   285 ---PYQWPFGSFAGGQ----WPPALP-THPPTTGGWP-----------PPLPTHP------PNHH 324
               .|:..|.:...|:    |....| .|..|...:|           |...|.|      |:..
Human  1620 NGQSYRGTFSTTVTGRTCQSWSSMTPHRHQRTPENYPNDGLTMNYCRNPDADTGPWCFTMDPSIR 1684

  Fly   325 YP---------------THPTTGGVPST------------------KRTTPRPTSPARPTTTRRP 356
            :.               ..||...|||.                  |:.|....:|.:....:.|
Human  1685 WEYCNLTRCSDTEGTVVAPPTVIQVPSLGPPSEQDCMFGNGKGYRGKKATTVTGTPCQEWAAQEP 1749

  Fly   357 ------------------TYPSYP-----SPVTTTTTTRR-------PVSGTSSEGLPLQCGNKN 391
                              .|...|     .|...|...|:       |:..:||    ..|| |.
Human  1750 HRHSTFIPGTNKWAGLEKNYCRNPDGDINGPWCYTMNPRKLFDYCDIPLCASSS----FDCG-KP 1809

  Fly   392 PVTPDQ--ERIVGGINASPHEFPW-IAVLFKSGKQFCGGSLITNSHILTAAHCV---ARMTSWDV 450
            .|.|.:  ..||||..|.||.:|| :::..:.||.||||:||:...:||||||:   :|.:|:.|
Human  1810 QVEPKKCPGSIVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEWVLTAAHCLKKSSRPSSYKV 1874

  Fly   451 AALTAHLGDYNIGTDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPICLPT 515
             .|.||   ..:..:..||.:  .:.||.      ......|:|:|.||.|...|.::.|.||| 
Human  1875 -ILGAH---QEVNLESHVQEI--EVSRLF------LEPTQADIALLKLSRPAVITDKVMPACLP- 1926

  Fly   516 SP----SQQSRSYSGQVATVAGWGSLREN-GPQPSILQKVDIPIWTNAECAR-KYGRAAPGGIIE 574
            ||    :.::..|      :.|||..:.. |  ..:|::..:.:..|..|.. ||          
Human  1927 SPDYMVTARTECY------ITGWGETQGTFG--TGLLKEAQLLVIENEVCNHYKY---------- 1973

  Fly   575 SMICAGQAAK--DSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWI 634
              |||...|:  |||.||||||:|..:..:|...|:.|||:||.:...||||.||:..:.||
Human  1974 --ICAEHLARGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYARVSRFVTWI 2033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829 21/79 (27%)
PTZ00449 <198..>376 CDD:185628 53/324 (16%)
Tryp_SPc 400..637 CDD:238113 85/247 (34%)
LPANP_005568.2 Kringle 28..105 CDD:395005
Kringle 142..219 CDD:395005
Kringle 256..333 CDD:395005
Kringle 370..447 CDD:395005
Kringle 484..561 CDD:395005
Kringle 598..675 CDD:395005
Kringle 712..789 CDD:395005
Kringle 826..903 CDD:395005
KR 938..1019 CDD:214527
Kringle 1054..1131 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1166
KR 1166..1246 CDD:214527
KR 1272..1352 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1365..1388 4/15 (27%)
KR 1386..1466 CDD:214527 21/89 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1476..1497 5/20 (25%)
KR 1500..1581 CDD:214527 10/80 (13%)
KR 1614..1695 CDD:214527 14/83 (17%)
Kringle 1720..1799 CDD:395005 10/78 (13%)
Tryp_SPc 1820..2034 CDD:238113 85/247 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.