DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and CG4477

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_648295.1 Gene:CG4477 / 39058 FlyBaseID:FBgn0035971 Length:315 Species:Drosophila melanogaster


Alignment Length:236 Identity:67/236 - (28%)
Similarity:101/236 - (42%) Gaps:38/236 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   418 FKSGKQFCGGSLITNSHILTAAHCVAR----MTSWDVAALTAHLGDYNIGTDFEVQHV-SRRIKR 477
            |.....||.|.::....::|:|||:..    :.|..|..:.|       ||...:::: :|....
  Fly    65 FFGDNHFCSGVILAPMFVMTSAHCLINKRRVLISSRVLLIVA-------GTLNRLKYIPNRTFVT 122

  Fly   478 LVRHKGFEFS-TLHN--DVAILTLSEPVPFTRE-IQPICLPTSPSQQSRSYSGQVATVAGWGSLR 538
            .|.|.....| |:.|  |..:|.:..|.|...| |....||..|     ...|....|.|||.:.
  Fly   123 PVTHIWLPDSFTMRNKQDFGLLKVKNPFPRNNEHISIARLPVHP-----PLPGLKCKVMGWGRMY 182

  Fly   539 ENGPQPSILQKVDIPIWTNAECARKYGRAAPGGIIESM--ICAGQA----AKDSCSGDSGGPMVI 597
            :.||..|.:..:|:.:..:..|| |:.|      :.|:  :||..:    |:..|.||.|.||:.
  Fly   183 KGGPLASYMLYIDVQVIDSEACA-KWLR------VPSVEHVCAVDSDDLTAQQPCGGDWGAPMLH 240

  Fly   598 NDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWIYKNI 638
            |.    |..|||:...|||....|.:||.|.|...||::.|
  Fly   241 NG----TVYGIVTILAGCGVSHLPSLYTNVHSNANWIHEKI 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 66/233 (28%)
CG4477NP_648295.1 Tryp_SPc 55..276 CDD:238113 66/233 (28%)
Blue background indicates that the domain is not in the aligned region.

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