DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and CG16998

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_648134.1 Gene:CG16998 / 38847 FlyBaseID:FBgn0035795 Length:258 Species:Drosophila melanogaster


Alignment Length:257 Identity:87/257 - (33%)
Similarity:124/257 - (48%) Gaps:25/257 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 LPLQCGNKNPVTPDQERIVGGINASPHEFPWIAVLFKSGKQFCGGSLITNSHILTAAHCVARMTS 447
            |.|.||:|......|||||||:....|..||:|.:...|...|..:|||:..::||.|||....|
  Fly     8 LLLICGHKTSALSPQERIVGGVEVPIHLTPWLASITVHGNYSCSSALITSLWLVTAGHCVQYPDS 72

  Fly   448 WDVAALTAHLGDYNIGTDFEVQHVSRR-IKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPI 511
            :.|.|          |:.|......|| :..::.|..|...||.||:|:|.|.:.......||.:
  Fly    73 YSVRA----------GSTFTDGGGQRRNVVSVILHPDFNLRTLENDIALLKLDKSFTLGGNIQVV 127

  Fly   512 CLPTSPSQQSRSYSGQVATVAGWGS--LRENGPQPSILQKVDIPIWTNAECARKYGRA-APGGII 573
            .||.    .|.:...:...|||||:  ..::..:|.:...| :.:.....|.|.|... .|  |.
  Fly   128 KLPL----PSLNILPRTLLVAGWGNPDATDSESEPRLRGTV-VKVINQRLCQRLYSHLHRP--IT 185

  Fly   574 ESMICAGQAAKDSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWIY 635
            :.|:||..|.:|.|.||||.|:| :.|..|   ||||:..||....:||||||:.:.:.||:
  Fly   186 DDMVCAAGAGRDHCYGDSGAPLV-HRGSSY---GIVSFAHGCADPHFPGVYTRLANYVTWIF 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 79/240 (33%)
CG16998NP_648134.1 Tryp_SPc 24..242 CDD:214473 78/238 (33%)
Blue background indicates that the domain is not in the aligned region.

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