DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and CG3650

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_611971.1 Gene:CG3650 / 37974 FlyBaseID:FBgn0035070 Length:249 Species:Drosophila melanogaster


Alignment Length:246 Identity:86/246 - (34%)
Similarity:119/246 - (48%) Gaps:23/246 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 QERIVGGINASPHEFPWIAV-LFKSGKQFCGGSLITNSHILTAAHCVARMTSWDVAALTAHLGDY 460
            |.|||||...:........| |...|..:|||||:|:||::|||||   :..:..:.:|...|..
  Fly    23 QPRIVGGTTTTLSAVGGFVVNLRYDGTFYCGGSLVTSSHVVTAAHC---LKGYQASRITVQGGVS 84

  Fly   461 NIGTDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPICLPTSPSQQSRSYS 525
            .:..    ..|.||:.|.....||..|:|:.||.::.|...:..:.      :.|.|..|.:...
  Fly    85 KLSQ----SGVVRRVARYFIPNGFSSSSLNWDVGVIRLQSALTGSG------ITTIPLCQVQWNP 139

  Fly   526 GQVATVAGWGSLRENGPQPS-ILQKVDIPIWTNAECARKY-GRAAPGGIIESMICAGQAAKDSCS 588
            |....|:|||:.|.....|| .|:.|.|.:.....|.|.| ||..   :..|..||....|||||
  Fly   140 GNYMRVSGWGTTRYGNSSPSNQLRTVRIQLIRKKVCQRAYQGRDT---LTASTFCARTGGKDSCS 201

  Fly   589 GDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWIYKNIK 639
            |||||.::..:    ...||||||:||...|||||||.|..:..:|.::||
  Fly   202 GDSGGGVIFKN----QLCGIVSWGLGCANAQYPGVYTSVHRVRSFILRSIK 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 82/239 (34%)
CG3650NP_611971.1 Tryp_SPc 25..243 CDD:214473 82/237 (35%)
Blue background indicates that the domain is not in the aligned region.

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