DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and Ctrc

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001071117.1 Gene:Ctrc / 362653 RGDID:1308379 Length:268 Species:Rattus norvegicus


Alignment Length:269 Identity:94/269 - (34%)
Similarity:142/269 - (52%) Gaps:34/269 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 CGNKNPVTPD--QERIVGGINASPHEFPW-IAVLF---KSGKQFCGGSLITNSHILTAAHCVARM 445
            ||  ||..|.  ..|:|||.:|.|:.:|| :::.:   .:.:..|||||||.||:||||||:.:.
  Rat    17 CG--NPAFPPNLSTRVVGGEDAVPNSWPWQVSLQYLKDDTWRHTCGGSLITTSHVLTAAHCINKD 79

  Fly   446 TSWDVAALTAHLGDYNIGTDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQP 510
            .::.|.     ||.||:..:.|...|...:..:..|:.:....|.||:||:.|:|||..:..||.
  Rat    80 FTYRVG-----LGKYNLTVEDEEGSVYAEVDTIYVHEKWNRLFLWNDIAIIKLAEPVELSNTIQV 139

  Fly   511 ICLPTSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAECAR------KYGRAAP 569
            .|:|...|...:.|.   ..|.|||.|..|||...:||:...||.::|.|:|      |      
  Rat   140 ACIPEEGSLLPQDYP---CYVTGWGRLWTNGPIAEVLQQGLQPIVSHATCSRLDWWFIK------ 195

  Fly   570 GGIIESMICA-GQAAKDSCSGDSGGPMVIN-DGGRYTQVGIVSWG--IGCGKGQYPGVYTRVTSL 630
              :.::|:|| |.....:|:||||||:... :.|.:...||||:|  .||...:.|.|:|||::.
  Rat   196 --VRKTMVCAGGDGVISACNGDSGGPLNCQAEDGSWQVHGIVSFGSSSGCNVHKKPVVFTRVSAY 258

  Fly   631 LPWIYKNIK 639
            ..||.:.|:
  Rat   259 NDWINEKIQ 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 87/250 (35%)
CtrcNP_001071117.1 Tryp_SPc 30..265 CDD:238113 87/250 (35%)
Blue background indicates that the domain is not in the aligned region.

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