DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and CG5390

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_609374.1 Gene:CG5390 / 34383 FlyBaseID:FBgn0032213 Length:406 Species:Drosophila melanogaster


Alignment Length:369 Identity:109/369 - (29%)
Similarity:163/369 - (44%) Gaps:79/369 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 TPRPTSPARPTTTRRPTYPSYPSPVTTTTTTRRPVSGTSSEGLP--------------------- 384
            ||:|:||..|....:.:..|..|....:::|:....|...|.:|                     
  Fly    36 TPKPSSPPPPVVNPKDSSGSTGSENGGSSSTQYQSCGDQKECVPRWLCANDTINTSGDGIIDIRL 100

  Fly   385 ---LQCGN------------KNPV---TPDQE-------------RIVGGIN--ASPHEFPW-IA 415
               .:|.|            |:|:   .||..             :|.|.:|  |...|||| :|
  Fly   101 GTDAECKNYLDLCCDLPNKRKDPIFEFKPDHPEGCGYQNPNGVGFKITGAVNQEAEFGEFPWMLA 165

  Fly   416 VLFKSGK---QFCGGSLITNSHILTAAHCVARMTSWDVAALTAHLGDYNIGTDFEV-QHVSRRIK 476
            :|.:.|.   ..|||:||..:.:|||||||...   ..:::....|:::..|..|: :|..|.:|
  Fly   166 ILREEGNLNLYECGGALIAPNVVLTAAHCVHNK---QPSSIVVRAGEWDTQTQTEIRRHEDRYVK 227

  Fly   477 RLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPICLPT--SPSQQSRSYSGQVATVAGWGSLR- 538
            .::.|:.|...:|:||||::.|..|......||.:|||.  ......|.|:      .|||..: 
  Fly   228 EIIYHEQFNKGSLYNDVAVMLLESPFTLQENIQTVCLPNVGDKFDFDRCYA------TGWGKNKF 286

  Fly   539 -ENGPQPSILQKVDIPIWTNAECARKYGRAAPGG---IIESMICA-GQAAKDSCSGDSGGPMVIN 598
             ::|....||:|||:|:....:|.........|.   :.:|.||| |:..||:|.||.|.|:|..
  Fly   287 GKDGEYQVILKKVDMPVVPEQQCETNLRETRLGRHFILHDSFICAGGEKDKDTCKGDGGSPLVCP 351

  Fly   599 DGG---RYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWIYKNIK 639
            ..|   |:...|||:||||||:...||||..|..|.|||...:|
  Fly   352 IAGQKNRFKSAGIVAWGIGCGEVNIPGVYASVAKLRPWIDAKLK 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628 9/34 (26%)
Tryp_SPc 400..637 CDD:238113 90/254 (35%)
CG5390NP_609374.1 CLIP_1 64..115 CDD:465709 6/50 (12%)
Tryp_SPc 153..390 CDD:214473 85/245 (35%)
Blue background indicates that the domain is not in the aligned region.

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