DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)k05911 and LOC3291452

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_552329.4 Gene:LOC3291452 / 3291452 VectorBaseID:AGAMI1_006761 Length:398 Species:Anopheles gambiae


Alignment Length:280 Identity:78/280 - (27%)
Similarity:126/280 - (45%) Gaps:39/280 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 VSGTSSEG-----------LPLQCGNKNPVTPDQERIVGGINASPHEFPWIAVLFKS--GKQFCG 426
            :..||:.|           |...||.....|     ||.|.....:|:|.:|.|:.:  .:.|||
Mosquito   127 LGSTSTSGGRFRCQITALKLACDCGRHRTPT-----IVNGFPTLTNEYPMMAGLWDNSVSRVFCG 186

  Fly   427 GSLITNSHILTAAHCVARMTSWDVAALTAHLGDYNIGTDFEVQHVSRR-IKRLVRHKGFEFSTLH 490
            .:::||.|:||||||:...|:   |.....:|:.|.....|..:..|. :...:||..:..::..
Mosquito   187 STIVTNRHVLTAAHCLLDRTA---AGTRVLVGEQNTNITNETPYTLRMLVSTFIRHPSYNPTSKA 248

  Fly   491 NDVAILTLSEPVPFTREIQPICLP----TSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVD 551
            ||:|::...:.:.|...:..:|||    ||..:.:|      .:..|||::....|....|.:..
Mosquito   249 NDIALVQTFDTIVFNPGVGRVCLPFRFGTSSFENAR------LSALGWGAIDFGAPSSKELLQTT 307

  Fly   552 IPIWTNAECARKYGRAAPGGIIESMICAGQAAKDSCSGDSGGPMVINDGGRYT--QVGIVSWGIG 614
            :.:.::..|..|..|.    |:.|.:|...|..|:|..|||||:...|.....  .:|:|.:|:.
Mosquito   308 LAVVSSTSCGTKLSRT----ILASQMCTFAAGNDTCQNDSGGPLYYTDPNSQLVYSIGVVGFGVA 368

  Fly   615 CGKGQYPGVYTRVTSLLPWI 634
            |. ..:|.|.|||||.|.||
Mosquito   369 CA-SSFPSVNTRVTSYLDWI 387

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829