DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and Clipb4

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_061505120.1 Gene:Clipb4 / 3290783 VectorBaseID:AGAMI1_007833 Length:737 Species:Anopheles gambiae


Alignment Length:322 Identity:104/322 - (32%)
Similarity:165/322 - (51%) Gaps:49/322 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 RPTYPSYPSPVTTTTTT------------RR-----PVSGTSSEGLPLQCGNKNPVTPDQ--ERI 400
            :|....|..|:.|...|            |:     ||:..:...||     :.||....  :|:
Mosquito   426 QPLITIYNKPINTHDDTLLLTQSRCGMLQRKTLVCCPVTSQARSSLP-----EPPVCGIHLADRV 485

  Fly   401 VGGINASPHEFPWIAVL--FKSGKQF---CGGSLITNSHILTAAHCVARM-TSWDVAALTAHLGD 459
            :||......||||.|::  .|....|   ||||||.:.:|:|||||:..: ..|.|..:  .||:
Mosquito   486 IGGQPTQIDEFPWTALIEFQKPDGSFGFHCGGSLINDRYIVTAAHCIKSIPRGWKVHRV--RLGE 548

  Fly   460 YNIGTDFEVQH-------VSRRIKRLVRHKGFEF--STLHNDVAILTLSEPVPFTREIQPICLPT 515
            :::.:..:.|:       :...|:::|.|.|::.  .:..||:|::..:.||.:::.::|||||.
Mosquito   549 WDLTSANDCQNEFCSDAPIDLDIEQIVVHTGYDTKDQSNANDIALIRFTRPVNYSQTVRPICLPL 613

  Fly   516 SPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAECARKYGRAAPGGII--ESMIC 578
            |.|.::|:::|..|..||||. .|:........||::.|.:..|||..|.|   |||:  ::.:|
Mosquito   614 SSSLRNRNHAGMPAYAAGWGK-TESATASEKKLKVEMNIKSLQECAPVYQR---GGILLKKTHMC 674

  Fly   579 AGQA-AKDSCSGDSGGPMVINDGGRYTQVGIVSWG-IGCGKGQYPGVYTRVTSLLPWIYKNI 638
            ||.. .||:||||||||::....|.:..:|:||:| ..||....|||||.|...:.||..||
Mosquito   675 AGGVRGKDTCSGDSGGPLMRQMSGSWYLIGVVSFGPQKCGAPGVPGVYTNVAEYVDWIKDNI 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628 7/37 (19%)
Tryp_SPc 400..637 CDD:238113 89/255 (35%)
Clipb4XP_061505120.1 None
Blue background indicates that the domain is not in the aligned region.

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