DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and ctrb.1

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_997783.1 Gene:ctrb.1 / 322451 ZFINID:ZDB-GENE-030131-1171 Length:263 Species:Danio rerio


Alignment Length:254 Identity:89/254 - (35%)
Similarity:140/254 - (55%) Gaps:26/254 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 PVTPDQERIVGGINASPHEFPW-IAVLFKSGKQFCGGSLITNSHILTAAHCVARMTSWDVAALTA 455
            ||.....|||.|..|.||.:|| :::...:|..|||||||..:.::|||||..|         |:
Zfish    26 PVVTGYARIVNGEEARPHSWPWQVSLQDSTGFHFCGGSLINENWVVTAAHCNVR---------TS 81

  Fly   456 H---LGDYNIGTDFE-VQHVSRRIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPICLPTS 516
            |   ||:::..::.| :|.::  :.:.::|..:...|::||:.::.|:.|......:.|:||   
Zfish    82 HRVILGEHDRSSNAEAIQTIA--VGKSIKHPNYNSFTINNDILLIKLATPAKINTHVSPVCL--- 141

  Fly   517 PSQQSRSYSGQVATV-AGWGSLRENGPQ-PSILQKVDIPIWTNAECARKYGRAAPGGIIESMICA 579
             ::.:.::.|.:..| :|||..|.|.|. |::||:..:|:.||.:|.|.:|.    .|.:.||||
Zfish   142 -AETNDNFPGGMKCVTSGWGLTRYNAPDTPALLQQAALPLLTNDDCKRYWGT----NITDLMICA 201

  Fly   580 GQAAKDSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWIYKNI 638
            |.:...||.||||||:|..:...:|.|||||||........|.||.|||.|..|:.:.|
Zfish   202 GASGVSSCMGDSGGPLVCENNRVWTLVGIVSWGSSTCSTSTPAVYARVTKLRAWVDQTI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 85/243 (35%)
ctrb.1NP_997783.1 Tryp_SPc 34..259 CDD:238113 85/243 (35%)
Blue background indicates that the domain is not in the aligned region.

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