DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)k05911 and Ovch2

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:289 Identity:91/289 - (31%)
Similarity:151/289 - (52%) Gaps:36/289 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   376 SGTSSEGLPLQCGNKNPVTPDQE-------RIVGGINASPHEFPWIAVLFKSGKQFCGGSLITNS 433
            |.|.|......|| |:.|.|..:       |||||.......:||...|.:..|..|||::|::.
  Rat    22 SATLSSIRAPDCG-KSLVKPWPQNYFSLFSRIVGGSQVEKGSYPWQVSLKQKQKHICGGTIISSQ 85

  Fly   434 HILTAAHCVARMTSWDVAALTAHL--GDYNIGTDFEVQHVSRRIKRLVRHKGFEFST---LHNDV 493
            .::|||||:|...    .|||.::  |:::: :..|....:..|:.::.|.  :|||   ::.|:
  Rat    86 WVITAAHCMANRN----IALTLNVTAGEHDL-SQAEPGEQTLAIETIIIHP--QFSTKKPMNYDI 143

  Fly   494 AILTLSEPVPFTREIQPICLPTSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNA 558
            |:|.:.....|.:.::|:||| .|.:|..  :|.:.|.||||.|.|.|..|.:||:|::||.|:.
  Rat   144 ALLKMVGTFQFGQFVRPVCLP-EPGEQFN--AGYICTTAGWGRLSEGGSLPQVLQQVNLPILTHE 205

  Fly   559 ECARKYGRAAPGGIIESMICAG--QAAKDSCSGDSGGPMVI-NDGGRYTQVGIVSWGIGCGKG-- 618
            ||.............::.:|.|  ...:|:|.|||||.::. |..|.:|..|:.|||:|||:.  
  Rat   206 ECEAVMLTLRNPITGKTFLCTGSPDGGRDACQGDSGGSLMCQNRKGAWTLAGVTSWGLGCGRSWR 270

  Fly   619 --------QYPGVYTRVTSLLPWIYKNIK 639
                    ..||::|.:..:||||:::::
  Rat   271 NNARKKEQGSPGIFTDLRRVLPWIHEHVQ 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628 91/289 (31%)
Tryp_SPc 400..637 CDD:238113 82/254 (32%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 82/254 (32%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.