DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and CG30088

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:269 Identity:89/269 - (33%)
Similarity:127/269 - (47%) Gaps:50/269 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   387 CG---NKNPVTPDQERIVGGINASPHEFPWIAVLFKSGKQFCGGSLITNSHILTAAHCVARMTSW 448
            ||   ..|..|    |||.|..|.....|::|.|:.|.:..|||::|::.:|||||||:.     
  Fly    33 CGVSYESNVAT----RIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSRYILTAAHCMR----- 88

  Fly   449 DVAALTAHLGDYNI--------------GTDFEVQHVSRRIKRLVRHKGFEFSTLHNDVAILTLS 499
              ..|...||:::|              ..:|::. ::.:.||..|.       |.||:|:|.||
  Fly    89 --PYLKVRLGEHDITRNPDCQGGSCSPPAEEFDIV-LATKYKRFDRF-------LANDIALLKLS 143

  Fly   500 EPVPFTREIQPICLPTSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAECARKY 564
            ..:.|...||||||..:|:.....:..|   ..|||. .|.....::||...:..:.|..|....
  Fly   144 RNIRFNVHIQPICLILNPAAAPNVHEFQ---AFGWGQ-TETNHSANVLQTTVLTRYDNRHCRSVL 204

  Fly   565 GRAAPGGIIESMICAGQAAKDSCSGDSGGPMV--INDGG--RYTQVGIVSWGIGCGKGQYPGVYT 625
            ...    |..:.:|.|....|:||||||||:|  :|..|  ||.|:||||:  |..|.|.|||||
  Fly   205 SMP----ITINQLCVGFQGSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSF--GDDKCQSPGVYT 263

  Fly   626 RVTSLLPWI 634
            .|.:.:.||
  Fly   264 YVPNYIRWI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 84/253 (33%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 84/253 (33%)
Blue background indicates that the domain is not in the aligned region.

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