DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and CG30082

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001188942.1 Gene:CG30082 / 246443 FlyBaseID:FBgn0050082 Length:280 Species:Drosophila melanogaster


Alignment Length:262 Identity:90/262 - (34%)
Similarity:122/262 - (46%) Gaps:47/262 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 PDQERIVGGINASPHEFPWIAVLFKSGKQFCGGSLITNSHILTAAHCVARMTSWDVAALTAHLGD 459
            |...|||||..|.....||:|.|.|:....|.|:|||...:||||||   :.|:.:  ||..||:
  Fly    35 PPTNRIVGGRTADIGSNPWLAYLHKNSSLVCTGTLITKRFVLTAAHC---LHSFHL--LTVRLGE 94

  Fly   460 YNIGTDFEVQHVSRRIKRLVRHKGFEFSTLH----------NDVAILTLSEPVPFTREIQPICLP 514
            |:..|  .:...|............|.:.:|          ||:.:|.|:..|.:...|:||||.
  Fly    95 YDTST--RIDCTSEFCIPTYEEYSVENAYIHTFFGGRQDSRNDIGLLKLNGTVVYKLFIRPICLF 157

  Fly   515 TSPSQ--QSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAECAR------KYGRAAPGG 571
            ..|.|  .|.:|.     .||||.: :.....::||.|::.....::|.|      .||:     
  Fly   158 RDPGQVPYSSTYE-----AAGWGKI-DLINTATVLQTVNLIRLDQSDCERSLRTSLSYGQ----- 211

  Fly   572 IIESMICAGQAAKDSCSGDSGGPMVIN-DGGRYT---QVGIVSWGIGCGKGQYPGVYTRVTSLLP 632
                 .||||...|:||||||||:... ..||.|   |:||||:|....:|  |||||.|.|...
  Fly   212 -----FCAGQWRADTCSGDSGGPLSRKMSNGRITRTVQLGIVSYGHYLCRG--PGVYTYVPSFTN 269

  Fly   633 WI 634
            ||
  Fly   270 WI 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 88/257 (34%)
CG30082NP_001188942.1 Tryp_SPc 40..274 CDD:238113 88/257 (34%)
Blue background indicates that the domain is not in the aligned region.

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