back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment l(2)k05911 and Cela2a

DIOPT Version :10

Sequence 1:	NP_723797.3	Gene:	l(2)k05911 / 34731	FlyBaseID:	FBgn0284244	Length:	639	Species:	Drosophila melanogaster
Sequence 2:	XP_063143222.1	Gene:	Cela2a / 24332	RGDID:	2548	Length:	279	Species:	Rattus norvegicus

Alignment Length:	272	Identity:	95/272 - (34%)
Similarity:	144/272 - (52%)	Gaps:	30/272 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly   375 VSGTSSEGLPLQCGNKNPVTPDQERIVGGINASPHEFPWIAVL--FKSGK--QFCGGSLITNSHI 435
            |:|..|.|.|..     .|..|..|:|||..|||:.:||...|  ..|||  ..|||||:.|:.:
  Rat    11 VAGALSCGYPTY-----EVQHDVSRVVGGQEASPNSWPWQVSLQYLSSGKWHHTCGGSLVANNWV 70

  Fly   436 LTAAHCVARMTSWDVAALTAHLGDYNIGTDFEVQHVSRRIKRLVRHKGFEFSTLH--NDVAILTL 498
            ||||||::...::.|.     ||.:::.|. |...::.::.:||.|:.:....|.  ||:|::.|
  Rat    71 LTAAHCISNSRTYRVL-----LGRHSLSTS-ESGSLAVQVSKLVVHEKWNAQKLSNGNDIALVKL 129

  Fly   499 SEPVPFTREIQPICLPTSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAEC--A 561
            :.||..|.:||..|||.:.:....:|.   ..|.|||.|:.||..|.:||:..:.:...|.|  |
  Rat   130 ASPVALTSKIQTACLPPAGTILPNNYP---CYVTGWGRLQTNGATPDVLQQGRLLVVDYATCSSA 191

  Fly   562 RKYGRAAPGGIIESMICA-GQAAKDSCSGDSGGPMVIN-DGGRYTQVGIVSWG--IGCGKGQYPG 622
            ..:|    ..:..:|:|| |.....||:||||||:... ..|::...||||:|  :||...:.|.
  Rat   192 SWWG----SSVKTNMVCAGGDGVTSSCNGDSGGPLNCQASNGQWQVHGIVSFGSTLGCNYPRKPS 252

  Fly   623 VYTRVTSLLPWI 634
            |:|||::.:.||
  Rat   253 VFTRVSNYIDWI 264

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.