DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k05911 and Tmprss2

DIOPT Version :10

Sequence 1:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:262 Identity:92/262 - (35%)
Similarity:134/262 - (51%) Gaps:22/262 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 LQCGNKNPVTPDQERIVGGINASPHEFPWIAVLFKSGKQFCGGSLITNSHILTAAHCVARMTS-- 447
            ::||.::  ...|.|||||..|||.::||...|...|...||||:||...|:||||||....|  
  Rat   241 IECGVRS--VRRQSRIVGGSTASPGDWPWQVSLHVQGIHVCGGSIITPEWIVTAAHCVEEPLSSP 303

  Fly   448 --WDVAALTAHLGDYNIGTDFEVQHVSR-RIKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQ 509
              |     ||..|.......|   :.|| ::::::.|..::..|.:||:|::.|..|:.|...::
  Rat   304 RYW-----TAFAGILKQSLMF---YGSRHQVEKVISHPNYDSKTKNNDIALMKLQTPLAFNDVVK 360

  Fly   510 PICLPTSPSQQSRSYSGQVATVAGWGSLRENGPQPSILQKVDIPIWTNAECARKYGRAAPGGIIE 574
            |:|||........:   |...::|||:..|.|....:|....:|:...::|..||  .....|..
  Rat   361 PVCLPNPGMMLDLA---QECWISGWGATYEKGKTSDVLNAAMVPLIEPSKCNSKY--IYNNLITP 420

  Fly   575 SMICAG--QAAKDSCSGDSGGPMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPWIYKN 637
            :|||||  |.:.|||.||||||:|......:..:|..|||.||.|...||||..||....|||:.
  Rat   421 AMICAGFLQGSVDSCQGDSGGPLVTLKNEIWWLIGDTSWGSGCAKAYRPGVYGNVTVFTDWIYQQ 485

  Fly   638 IK 639
            ::
  Rat   486 MR 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 88/243 (36%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747 2/5 (40%)
Tryp_SPc 254..485 CDD:238113 88/243 (36%)
Blue background indicates that the domain is not in the aligned region.

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