DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16820 and Jhbp12

DIOPT Version :10

Sequence 1:NP_609627.1 Gene:CG16820 / 34730 FlyBaseID:FBgn0032495 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_651265.1 Gene:Jhbp12 / 42924 FlyBaseID:FBgn0039203 Length:252 Species:Drosophila melanogaster


Alignment Length:252 Identity:50/252 - (19%)
Similarity:100/252 - (39%) Gaps:39/252 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 SVTLSSGSNEVTPCSLNSPDLNECIRGLIQSFAPKLRYQGVPEFNMDSIDPYFYKRGIFRYTNDG 139
            :||.:....|..|......:.::|:...:.....:|: .|..||.:..::|...|:.:....|..
  Fly    21 TVTAAQELPEGFPKCKRDANFDKCLVDAVNVAIQQLK-AGNREFGIPPLEPLTVKKLVIDAGNAP 84

  Fly   140 IQGGLLIKNMEIYGISQLQVNSVAANFTD-NGFIIKLGVELPQLKAGGHFKADVKFGGLRLVP-- 201
            |.....:||::::  ..:..:.:....|| :..:|.......:::..|.::..   |.:.|:|  
  Fly    85 INLRQALKNVKVH--DMISTSKIQRYRTDLDKHLIICDSRTDRIEMIGDYEMS---GRILLLPIT 144

  Fly   202 -KGPFNITIDNIKATILTDGHIEQLPSGQ---------QRLSLHRLNANVNIGDAKVVAN--GIF 254
             .|..|:|:.|.|        ||....|:         .||..:|    |:....:|..|  .:|
  Fly   145 GHGKANVTLINTK--------IEHRLIGEPFEKDGVKYMRLKDYR----VSFDPKRVYMNFENLF 197

  Fly   255 SDRNLNAMILNLVNENLPEI---TRVGIPATREQWAPILIAHINEFFAKVPIEKFLV 308
            :|:.|:..:...:|||...:   .:||.   .:.:..|.....|:.|.|||.:...:
  Fly   198 NDKTLSDGMNRFLNENWETVFNELKVGY---AKSFGIIFRELSNKLFEKVPFDNIFL 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16820NP_609627.1 JHBP 79..308 CDD:214779 48/246 (20%)
Jhbp12NP_651265.1 JHBP 14..251 CDD:461956 50/250 (20%)

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