DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16820 and Jhbp4

DIOPT Version :10

Sequence 1:NP_609627.1 Gene:CG16820 / 34730 FlyBaseID:FBgn0032495 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_650518.1 Gene:Jhbp4 / 41948 FlyBaseID:FBgn0038394 Length:270 Species:Drosophila melanogaster


Alignment Length:255 Identity:51/255 - (20%)
Similarity:106/255 - (41%) Gaps:29/255 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 VTLSSGS------NEVTP----------CSLNSPDLNECIRGLIQSFAPKLRYQGVPEFNMDSID 124
            :|::.|:      |:..|          |..::|:.::|.|.|.:...|.|. .|:||..:.|.:
  Fly    23 ITVTHGAYTREIVNDKLPLQERPSWLQTCKRSNPNEDKCFRQLFEGCFPALA-AGIPEIGVKSFE 86

  Fly   125 PYFYKRGIFRYTNDGIQGGLLI----KNMEIYGISQLQVNSVAANFTDNGFIIKLGVELPQLKAG 185
            |.    .|.:.:.....|.|::    :::.|.|.|...|...:.:....  ::...:|||:|:..
  Fly    87 PL----NIDQVSVSKGSGNLVLSGGFQDLVIRGPSNATVRRASLDLERR--LLNFELELPRLRIR 145

  Fly   186 GHFKADVKFGGLRLVPKGPFNITIDNIKATILTDGHI-EQLPSGQQRLSLHRLNANVNIGDAKVV 249
            ..:........|.||..|...:.:.|:..|:.|...: .:..:|.:.:.:..:....::|..::.
  Fly   146 AKYNLKGNILLLPLVGSGDVAMALKNVHTTVYTRISLRNETRTGDEIIHIDEMKVGFDVGAMRIH 210

  Fly   250 ANGIFSDRNLNAMILN-LVNENLPEITRVGIPATREQWAPILIAHINEFFAKVPIEKFLV 308
            ...:|:...:.|..:| .:|:|..|:.....|......|.|.....|..|:|:|.:.:||
  Fly   211 LKNLFNGNEILAASINSFLNQNGKEVIAELRPDLELGLADIFHGLWNNVFSKMPTKLWLV 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16820NP_609627.1 JHBP 79..308 CDD:214779 48/250 (19%)
Jhbp4NP_650518.1 JHBP 42..270 CDD:214779 45/234 (19%)

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