DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16820 and Jhbp13

DIOPT Version :10

Sequence 1:NP_609627.1 Gene:CG16820 / 34730 FlyBaseID:FBgn0032495 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_609626.1 Gene:Jhbp13 / 34729 FlyBaseID:FBgn0032494 Length:250 Species:Drosophila melanogaster


Alignment Length:247 Identity:74/247 - (29%)
Similarity:130/247 - (52%) Gaps:15/247 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 AVPSSSIDFAVAPASVTLSSGSNEVTPCSLNSPDLNECIRGLIQSFAPKLRYQGVPEFNMDSIDP 125
            |.|:....||..|             .||.....|.||::.|..:..|:|: .|.||..::..:|
  Fly    17 AAPTDKNYFADLP-------------KCSTEEDQLGECVKQLFNTLTPRLK-DGNPELRIEPYEP 67

  Fly   126 YFYKRGIFRYTNDGIQGGLLIKNMEIYGISQLQVNSVAANFTDNGFIIKLGVELPQLKAGGHFKA 190
            ....|..|:|::..:.|.:.::|.:|||.|..:...|:.....:...::|..::|:|...|.:||
  Fly    68 LHLNRTSFQYSSGTVNGRITVRNAKIYGFSSNRAKEVSVKLNGDKVKLRLVTQMPKLNIVGSYKA 132

  Fly   191 DVKFGGLRLVPKGPFNITIDNIKATILTDGHIEQLPSGQQRLSLHRLNANVNIGDAKVVANGIFS 255
            |::...|:|.|||.||:|:.:::|..:|||.:.: ..|.:...|..:::...|.|..:.|||||:
  Fly   133 DMQVNQLQLKPKGEFNVTLLDVEAITVTDGEVYE-KDGHRFFRLKNIDSKPKIKDLVIKANGIFA 196

  Fly   256 DRNLNAMILNLVNENLPEITRVGIPATREQWAPILIAHINEFFAKVPIEKFL 307
            |..|:.:.||:.|:...:|..:.:|.||:.|.|:::...||.|..|||::||
  Fly   197 DPELDKIALNVANQYWRDIYGIMLPETRQFWQPLMLRMFNEAFELVPIDQFL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16820NP_609627.1 JHBP 79..308 CDD:214779 69/229 (30%)
Jhbp13NP_609626.1 JHBP 22..249 CDD:214779 72/242 (30%)

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