DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16820 and CG3246

DIOPT Version :10

Sequence 1:NP_609627.1 Gene:CG16820 / 34730 FlyBaseID:FBgn0032495 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster


Alignment Length:138 Identity:29/138 - (21%)
Similarity:56/138 - (40%) Gaps:28/138 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 IKNMEIYGISQLQVNSVAANFTD---NGFIIKLGVELPQLKAGGHFKADVKFGGLRLVPKGPFNI 207
            :|.::.||:|:.:::.:..:..:   ||     |::|.|:...|.:.....|.    ...|||.:
  Fly    93 MKQVKAYGLSKFRIDKMNLDLKEMRFNG-----GLQLDQMLVKGQYTLSSFFS----KANGPFTV 148

  Fly   208 TIDNIKATILTDGHIEQLPSGQQRLSLHRLNANVNIGDAKVVANGIFSDRNLNAMILNLVNENLP 272
            .:.|:.|.......:|:  .||  |:..|:..::.           |||..::...|.||.....
  Fly   149 VLKNVYAEATAFLAVER--DGQ--LATDRIKIDIT-----------FSDMTMDFQNLGLVGSVFQ 198

  Fly   273 EITRVGIP 280
            .:.. |.|
  Fly   199 SVVN-GAP 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16820NP_609627.1 JHBP 79..308 CDD:214779 29/138 (21%)
CG3246NP_608781.2 JHBP 31..246 CDD:214779 29/138 (21%)
Grp7_allergen 260..418 CDD:319052
Blue background indicates that the domain is not in the aligned region.

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