DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp13 and CG11854

DIOPT Version :10

Sequence 1:NP_609626.1 Gene:Jhbp13 / 34729 FlyBaseID:FBgn0032494 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_651358.4 Gene:CG11854 / 43037 FlyBaseID:FBgn0039299 Length:250 Species:Drosophila melanogaster


Alignment Length:269 Identity:55/269 - (20%)
Similarity:111/269 - (41%) Gaps:46/269 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYCTIGLLSLLALGCSAAPTDKNYFADLP----KCSTEEDQLGECVKQLFN-TLTPRLKDGNPEL 60
            |..|:.|  :|..||::.   ..:.:|.|    :|:..::|   |::...| .|....|.|..||
  Fly     1 MELTLAL--VLLFGCAST---YGHASDFPSGIERCAIMDEQ---CLEDRVNFVLRNYAKSGIKEL 57

  Fly    61 RIEPYEPLHLNRTSF-QYSSGTVNGRITVRNAKIYGFSSNRAKEVSVKLNGDKVKLRLVTQMPKL 124
            .:.|.:|||:.:... :.....||..::.....|.|.....||.||.........:.||.::|::
  Fly    58 GLIPLDPLHVKKFKIGRNPHSPVNIDLSFHEMDILGLHQGVAKRVSGFTRDLSRSIELVMEVPEI 122

  Fly   125 NIVGSYKADMQVNQLQLKPKGEFNVTL--------LDVEAITVTDGEVY--------EKD-GHRF 172
            .:.|.|..|.::..|.:...|..::.|        :.::.::..|.:.|        |.| .|..
  Fly   123 GVRGPYSVDGRILILPITGNGIADIRLTRTKVRAQIKLKRVSKGDHQTYAEVMNIKVELDPSHVT 187

  Fly   173 FRLKNIDSKPKIKDLVIKANGIFADPELDKIALNVANQYWRDIYGIMLPETRQFWQPLMLRMFNE 237
            ::|:|:.:..|               :|.:....:.|:.|:||:..:.|...:.:..:...:.:.
  Fly   188 YQLENLFNGQK---------------DLSENMHALINENWKDIFNELKPGIGEAFGLIAKSVVDR 237

  Fly   238 AFELVPIDQ 246
            .|..:|::|
  Fly   238 IFGKLPLEQ 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp13NP_609626.1 JHBP 22..249 CDD:214779 49/248 (20%)
CG11854NP_651358.4 JHBP 21..249 CDD:214779 49/244 (20%)

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