DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5945 and to

DIOPT Version :9

Sequence 1:NP_001260439.1 Gene:CG5945 / 34729 FlyBaseID:FBgn0032494 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001287525.1 Gene:to / 43036 FlyBaseID:FBgn0039298 Length:249 Species:Drosophila melanogaster


Alignment Length:180 Identity:48/180 - (26%)
Similarity:83/180 - (46%) Gaps:20/180 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 CSAAPTDKNYFADLPKCSTEEDQLGECVKQLFNTL-TPRLKDGNPELRIEPYEPLHLNR--TSFQ 76
            |.....|..:..|...|...:   |||:.:|.||| :....:|:|.|.:...:||.::|  .|..
  Fly    11 CLLVSVDAKFPEDPKPCKYGD---GECIMKLCNTLFSENSAEGDPGLNLMQLDPLKVDRMVISQG 72

  Fly    77 YSSGTVNGRITVRNAKIYGFSSNRAKEVSVKLNG------DKVKLRLVTQMPKLNIVGSYKADMQ 135
            .||..|...:|..:..:||....|.    ||:.|      .|.::::||:  ..::||.|....:
  Fly    73 ESSSPVGITLTFTDNLLYGIKDQRI----VKVKGFGRDLTAKHEVKIVTK--TFSLVGPYNIQGK 131

  Fly   136 VNQLQLKPKGEFNVTLLDVEAITVTDGEVYEKDGHRFFRLKN--IDSKPK 183
            |..|.:...|:.|:|:::|.||....|:...|:|..:..:.:  |..||:
  Fly   132 VLILPISGTGQSNMTMVNVRAIVSFSGKPLVKNGETYLDVTDLKITMKPE 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5945NP_001260439.1 JHBP 22..249 CDD:214779 46/173 (27%)
toNP_001287525.1 JHBP 5..245 CDD:284096 48/180 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470498
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11008
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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