DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5945 and CG10264

DIOPT Version :9

Sequence 1:NP_001260439.1 Gene:CG5945 / 34729 FlyBaseID:FBgn0032494 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_650518.1 Gene:CG10264 / 41948 FlyBaseID:FBgn0038394 Length:270 Species:Drosophila melanogaster


Alignment Length:218 Identity:49/218 - (22%)
Similarity:89/218 - (40%) Gaps:28/218 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LPKCSTEEDQLGECVKQLFNTLTPRLKDGNPELRIEPYEPLHLNRTSFQYSSGTVNGRITVRNAK 92
            |..|........:|.:|||....|.|..|.||:.::.:|||::::.|....||.:......::..
  Fly    48 LQTCKRSNPNEDKCFRQLFEGCFPALAAGIPEIGVKSFEPLNIDQVSVSKGSGNLVLSGGFQDLV 112

  Fly    93 IYGFSSNRAKEVSVKLNGDKVKLRLVTQMPKLNIVGSYKADMQVNQLQLKPKGEFNVTLLDVEAI 157
            |.|.|:...:..|:.|  ::..|....::|:|.|...|.....:..|.|...|:..:.|.:|...
  Fly   113 IRGPSNATVRRASLDL--ERRLLNFELELPRLRIRAKYNLKGNILLLPLVGSGDVAMALKNVHTT 175

  Fly   158 ----------TVTDGEVYEKD--------GHRFFRLKNIDSKPKIKDLVIKA----NG--IFAD- 197
                      |.|..|:...|        |.....|||:.:..:|....|.:    ||  :.|: 
  Fly   176 VYTRISLRNETRTGDEIIHIDEMKVGFDVGAMRIHLKNLFNGNEILAASINSFLNQNGKEVIAEL 240

  Fly   198 -PELDKIALNVANQYWRDIYGIM 219
             |:|:....::.:..|.:::..|
  Fly   241 RPDLELGLADIFHGLWNNVFSKM 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5945NP_001260439.1 JHBP 22..249 CDD:214779 49/218 (22%)
CG10264NP_650518.1 JHBP 42..270 CDD:214779 49/218 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470526
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11008
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.