DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5945 and CG3246

DIOPT Version :9

Sequence 1:NP_001260439.1 Gene:CG5945 / 34729 FlyBaseID:FBgn0032494 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster


Alignment Length:222 Identity:46/222 - (20%)
Similarity:88/222 - (39%) Gaps:43/222 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLSLLALGCSAAPTDKNYFADLPKCSTEEDQLGECVKQLFNTLTPRLK-----------DGNPEL 60
            |:.|:|.||....:.:...|...:.|..:|.|.  :|:...::..:::           .|.|.:
  Fly     9 LVGLMASGCHIVHSQEPGDAVEQEASESDDALK--IKESQASIAAQVEAMLVHFQQEDPQGLPGV 71

  Fly    61 RIEPYEPLHLNRTSFQYSSGTVNGRITVRNAKIYGFSSNRAKEVSVKLNGDKVKLRL--VTQMPK 123
            .:.  :||.:  .:.:.|.|..|  :.::..|.||.|..|..    |:|.|..::|.  ..|:.:
  Fly    72 PVP--DPLEV--PNVKKSMGMAN--LDMKQVKAYGLSKFRID----KMNLDLKEMRFNGGLQLDQ 126

  Fly   124 LNIVGSYKADMQVNQLQLKPKGEFNVTLLDVEAITVTDGEVYEKDGHRFFRLKNIDSKPKIKDLV 188
            :.:.|.|    .::....|..|.|.|.|.:|.| ..|.....|:||             ::....
  Fly   127 MLVKGQY----TLSSFFSKANGPFTVVLKNVYA-EATAFLAVERDG-------------QLATDR 173

  Fly   189 IKANGIFADPELDKIALNVANQYWRDI 215
            ||.:..|:|..:|...|.:....::.:
  Fly   174 IKIDITFSDMTMDFQNLGLVGSVFQSV 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5945NP_001260439.1 JHBP 22..249 CDD:214779 41/207 (20%)
CG3246NP_608781.2 JHBP 31..246 CDD:214779 40/200 (20%)
Grp7_allergen 260..418 CDD:293589
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470315
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11008
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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