DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp13 and CG3246

DIOPT Version :10

Sequence 1:NP_609626.1 Gene:Jhbp13 / 34729 FlyBaseID:FBgn0032494 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_608781.2 Gene:CG3246 / 33564 FlyBaseID:FBgn0031538 Length:445 Species:Drosophila melanogaster


Alignment Length:222 Identity:46/222 - (20%)
Similarity:88/222 - (39%) Gaps:43/222 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLSLLALGCSAAPTDKNYFADLPKCSTEEDQLGECVKQLFNTLTPRLK-----------DGNPEL 60
            |:.|:|.||....:.:...|...:.|..:|.|.  :|:...::..:::           .|.|.:
  Fly     9 LVGLMASGCHIVHSQEPGDAVEQEASESDDALK--IKESQASIAAQVEAMLVHFQQEDPQGLPGV 71

  Fly    61 RIEPYEPLHLNRTSFQYSSGTVNGRITVRNAKIYGFSSNRAKEVSVKLNGDKVKLRL--VTQMPK 123
            .:.  :||.:  .:.:.|.|..|  :.::..|.||.|..|..    |:|.|..::|.  ..|:.:
  Fly    72 PVP--DPLEV--PNVKKSMGMAN--LDMKQVKAYGLSKFRID----KMNLDLKEMRFNGGLQLDQ 126

  Fly   124 LNIVGSYKADMQVNQLQLKPKGEFNVTLLDVEAITVTDGEVYEKDGHRFFRLKNIDSKPKIKDLV 188
            :.:.|.|    .::....|..|.|.|.|.:|.| ..|.....|:||             ::....
  Fly   127 MLVKGQY----TLSSFFSKANGPFTVVLKNVYA-EATAFLAVERDG-------------QLATDR 173

  Fly   189 IKANGIFADPELDKIALNVANQYWRDI 215
            ||.:..|:|..:|...|.:....::.:
  Fly   174 IKIDITFSDMTMDFQNLGLVGSVFQSV 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp13NP_609626.1 JHBP 22..249 CDD:214779 41/207 (20%)
CG3246NP_608781.2 JHBP 31..246 CDD:214779 40/200 (20%)
Grp7_allergen 260..418 CDD:319052
Blue background indicates that the domain is not in the aligned region.

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